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. 2020 Oct 22;10(6):453–462. doi: 10.1007/s13659-020-00275-9

Table 2.

MOE binding energies S (Kcal mol−1) of best binding pose for compounds 3, 16, 23, 24, 25, 29, 40 and native ligands into 7BQY and 7bV2 (London dG as score function)

Comp Protein Receptor Distance (Å) S (London dG)
3 7BQY Glu166-Gln189-Gly143-Ser144 2.9, 2.9, 3.2, 3.2 − 8.3
7BV2 Arg553-Arg553-Arg553-Arg553-Arg624-Ser759 3.1, 3.2, 3.2, 2.7, 3.2, 2.9 − 8.7
16 7BQY Glu166-Glu166-His164-Gln189-Gly143-Thr26 3.3, 4.5, 3.1, 4.2, 3.7, 2.6 − 9.1
7BV2 Arg553-Arg553-Arg553-Arg553-Arg553-Arg553-Asp623-Asp760-Ser814 2.9, 3.6, 3.8, 2.9, 3.0, 3.5, 3.1, 2.9, 2.8 − 8.5
23 7BQY Glu166-Glu166-Glu166-Glu166-Glu166-phe140-Gln189-Met49-Glu47-Glu47-Glu47-Glu47-Glu47-Glu47 2.99-3.01-3.79-3.26-3.9-3.26-3.13-4.06-3.3-3.3-3.52-2.9-2.9-3.6 − 9.0
7BV2 Arg553-Arg553-Thr680- Asp623-Asp623-Asp623-Asp623-Asp684-Ser682 2.97, 2.83, 3.19, 3.38, 3.38, 3.24, 3.24, 2.9, 2.87 − 8.11
24 7BQY Glu166-Glu166-Glu166-Glu166-Glu166-Glu166-phe140-Gly143-Gln189-Gln189 3.4, 3.4, 3.2, 3.6, 3.9, 2.7, 3.0, 2.8, 3.2, 3.0 − 8.5
7BV2 Thr680-Ser682-Arg553-Cys813-Cys813-Leu758-Asp618-Asp618-Asp618-Asp618-Asp760-Asp760-Asp760-Asp760-Asp760-Asp760-Asp760 3.1, 3.6, 3.6, 3.6, 3.6, 4.2, 2.9, 3.8, 3.5, 2.8, 2.8, 3.5, 3.5, 3.0, 3.9, 3.0, 2.9, 2.9 − 8.3
25 7BQY Glu166-Thr190-Asn119 3.9, 2.9, 3.0 − 7.9
7BV2 Asp760-Arg553-Arg553-Lys621 3.0, 2.8, 3.0, 3.8 − 8.2
29 7BQY Glu166-Gln192-His41-Cys145-His41 2.8, 3.2, 3.1, 3.4, 3.1 − 7.7
7BV2 Arg553-Arg553-Arg553-Arg553-Arg553-Arg553-Arg553-Arg624-Arg624 2.9, 2.9, 3.1, 3.2, 3.4, 3.7, 2.8, 2.9, 2.9 − 8.3
40 7BQY Ser144-Gly143-Cys145-Gln189 3.3, 3.1, 3.5, 2.7 − 7.9
7BV2 Arg553-Arg553-Asp760-Arg836 3.2, 3.0, 3.2, 4.1 − 8.2
Ligands 7BQY Glu166-Glu166-Glu166-Gln189-His163-His164-Cys145-Gln189-Thr190-Ala191-Thr26-Thr25 3, 2.7, 2.6, 3.2, 2.5, 3.0, 3.1, 3.2 − 7.8
7BV2 Arg553-Arg553-Arg553-Arg553-Arg553-Asp623-Asn691-Ser759-Ser682 2.3, 2.4, 2.3, 2.4, 3.9, 2.3, 2.7, 2.6, 4.1 − 5.9