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. 2020 Oct 21;5(5):e00937-20. doi: 10.1128/mSphere.00937-20

TABLE 2.

FUBAR results for CTRPa

Codon no. Amino acids Amino acid frequencies in:
FUBAR posterior probability of positive selection
Haiti South America America Africa
17 H, P 1, 0 0.96, 0.04 0.97, 0.03 0, 1 0.95
319 N, D 1, 0 0.96, 0.04 0.97, 0.03 0, 1 0.82
659 R, Q 1, 0 1, 0 1, 0 0.3, 0.7 0.94
1046 K, N 1, 0 0.88, 0.12 0.91, 0.09 0, 1 0.83
1260 N, S 1, 0 0.92, 0.08 0.94, 0.06 0.27, 0.73 0.96
2093 P, S 1, 0 0.62, 0.38 0.73, 0.27 0, 1 0.94
2098 Q, E 1, 0 0.96, 0.04 0.97, 0.03 0.17, 0.83 0.96
a

PF3D7_0315200 (circumsporozoite and TRAP-related protein; 2,114 amino acids [aa]). Only codons with differential frequencies between Haiti and Africa were retained.