TABLE 2.
Codon no. | Amino acids | Amino acid frequencies in: |
FUBAR posterior probability of positive selection | |||
---|---|---|---|---|---|---|
Haiti | South America | America | Africa | |||
17 | H, P | 1, 0 | 0.96, 0.04 | 0.97, 0.03 | 0, 1 | 0.95 |
319 | N, D | 1, 0 | 0.96, 0.04 | 0.97, 0.03 | 0, 1 | 0.82 |
659 | R, Q | 1, 0 | 1, 0 | 1, 0 | 0.3, 0.7 | 0.94 |
1046 | K, N | 1, 0 | 0.88, 0.12 | 0.91, 0.09 | 0, 1 | 0.83 |
1260 | N, S | 1, 0 | 0.92, 0.08 | 0.94, 0.06 | 0.27, 0.73 | 0.96 |
2093 | P, S | 1, 0 | 0.62, 0.38 | 0.73, 0.27 | 0, 1 | 0.94 |
2098 | Q, E | 1, 0 | 0.96, 0.04 | 0.97, 0.03 | 0.17, 0.83 | 0.96 |
PF3D7_0315200 (circumsporozoite and TRAP-related protein; 2,114 amino acids [aa]). Only codons with differential frequencies between Haiti and Africa were retained.