Table 1.
Summary statistics of LM11 and CML25 reads mapped to B73 reference genome.
| Parameters | LM11 | CML25 | ||||
|---|---|---|---|---|---|---|
| Leaf | Pollen | Ovule | Leaf | Pollen | Ovule | |
| Number of input reads | 27,014,405 | 18,415,967 | 21,603,284 | 24,873,578 | 21,310,663 | 26,208,530 |
| Average input read length (bp) | 292 | 292 | 292 | 291 | 292 | 291 |
| Uniquely mapped reads number | 24,077,296 | 14,657,912 | 10,875,298 | 21,152,840 | 17,387,192 | 21,286,482 |
| Uniquely mapped reads (%) | 89.13 | 79.58 | 50.34 | 85.04 | 81.59 | 81.22 |
| Average mapped length (bp) | 288.67 | 287.76 | 288.43 | 287.61 | 288.06 | 287.17 |
| Number of reads mapped to multiple loci | 1,291,087 | 1,410,947 | 5,902,841 | 1,308,873 | 1,438,295 | 2,235,321 |
| Reads mapped to multiple loci (%) | 4.78 | 7.66 | 27.32 | 5.26 | 6.75 | 8.53 |
| Reads unmapped: too short (%) | 5.31 | 10.40 | 5.47 | 8.86 | 10.60 | 8.74 |
| Reads unmapped: other (%) | 0.28 | 0.26 | 3.19 | 0.30 | 0.42 | 0.35 |