Skip to main content
. 2020 Oct 20;8:e10148. doi: 10.7717/peerj.10148

Table 2. Potential miRNAs binding SNIP1 and co-expression analysis for the miRNA-SNIP1 in CESC.

miRNA Position in the UTRa Seed matcha Context++ score percentilea rb p-valueb
hsa-miR-29a-3p 293–299 7mer-m8 96 −0.165 3.91E−03
hsa-miR-542-3p 836–842 7mer-m8 94 −0.057 3.19E−01
hsa-miR-384 314–321 8mer 91 0.000 1.00E +00
hsa-miR-520d-5p 361–367 7mer-m8 90 0.023 6.91E−01
hsa-miR-371a-5p 504–510 7mer-m8 89 −0.034 5.59E−01
hsa-miR-520a-3p 535–541 7mer-1A 88 0.098 8.66E−02
hsa-miR-520b 535–541 7mer-1A 87 0.012 8.29E−01
hsa-miR-520c-3p 535–541 7mer-1A 87 0.017 7.64E−01
hsa-miR-362-3p 1,058–1,064 7mer-1A 66 −0.034 5.59E−01
hsa-miR-590-3p 1,191–1,197 7mer-m8 59 −0.149 8.83E−03
hsa-miR-107 2,140–2,146 7mer-1A 46 0.013 8.15E−01
hsa-miR-217 2,143–2,149 7mer-1A 46 −0.083 1.50E−01

Notes.

CESC, cervical squamous cell carcinoma and endocervical adenocarcinoma.

a

Analysis from TargetScan7.2 (http://www.targetscan.org/vert_72/).

b

Analysis from starBase v3.0 pan-cancer analysis (http://starbase.sysu.edu.cn/panMirCoExp.php).