Table 2. Potential miRNAs binding SNIP1 and co-expression analysis for the miRNA-SNIP1 in CESC.
miRNA | Position in the UTRa | Seed matcha | Context++ score percentilea | rb | p-valueb |
---|---|---|---|---|---|
hsa-miR-29a-3p | 293–299 | 7mer-m8 | 96 | −0.165 | 3.91E−03 |
hsa-miR-542-3p | 836–842 | 7mer-m8 | 94 | −0.057 | 3.19E−01 |
hsa-miR-384 | 314–321 | 8mer | 91 | 0.000 | 1.00E +00 |
hsa-miR-520d-5p | 361–367 | 7mer-m8 | 90 | 0.023 | 6.91E−01 |
hsa-miR-371a-5p | 504–510 | 7mer-m8 | 89 | −0.034 | 5.59E−01 |
hsa-miR-520a-3p | 535–541 | 7mer-1A | 88 | 0.098 | 8.66E−02 |
hsa-miR-520b | 535–541 | 7mer-1A | 87 | 0.012 | 8.29E−01 |
hsa-miR-520c-3p | 535–541 | 7mer-1A | 87 | 0.017 | 7.64E−01 |
hsa-miR-362-3p | 1,058–1,064 | 7mer-1A | 66 | −0.034 | 5.59E−01 |
hsa-miR-590-3p | 1,191–1,197 | 7mer-m8 | 59 | −0.149 | 8.83E−03 |
hsa-miR-107 | 2,140–2,146 | 7mer-1A | 46 | 0.013 | 8.15E−01 |
hsa-miR-217 | 2,143–2,149 | 7mer-1A | 46 | −0.083 | 1.50E−01 |
Notes.
CESC, cervical squamous cell carcinoma and endocervical adenocarcinoma.
Analysis from TargetScan7.2 (http://www.targetscan.org/vert_72/).
Analysis from starBase v3.0 pan-cancer analysis (http://starbase.sysu.edu.cn/panMirCoExp.php).