Table 3. Summary of Enrichr analyses.
Hits and biological function for Enrichr analyses of panels of clustered upregulated and downregulated genes from iLINCS clustering analysis.
PANELS OF CLUSTERED UPREGULATED GENE ANALYSIS | ||
---|---|---|
Analysis | Select Targets | Function |
KEGG Signaling Pathways | FOXO, MAPK, Wnt | cell metabolism, inflammation, cell growth, mitochondrial function |
Protein-Protein Interactions | RPS6KA3, MAPK14, GSK3B, CDK1, CUL1, SKP1, PCNA, HDAC1, ESR1 | metabolism, cell proliferation, degradation/ubiquitination, chromatin remodeling |
Kinases | AKT1, MAP2K2, PTK2, ATR, NMUR2, FFAR1 | glucose metabolism, cell cycle regulation, energy homeostasis |
Transcription Factors | WT1, TRIM28, NFIB, NUCKS1, TCF3, ESR1, ESR2, ELK3, CEBPB | developmental processes, immune response, estrogen receptors |
PANELS OF CLUSTERED DOWNREGULATED GENE ANALYSIS | ||
KEGG Signaling Pathways | p53 signaling, HTLV infection, hepatitis B | inflammation, impaired immunity, and cell proliferation |
Protein-Protein Interactions | HDAC2, HDAC1, PCNA, BRCA1, CREBBP, CSNK2A1, NFKB2, MYC | Chromatin remodeling/HDAC inhibitors, immunity/cell cycle regulation, ubiquitination |
Kinases | PPARγ, RXR, PXK, ABL2, RYK, WEE1, LPHN1, NR3C1, GPR37 | CNS development, cell cycle progression, cytoskeletal remodeling carbohydrate/fatty acid metabolism, inflammation |
Transcription Factors | MYC, MYCN, NUCKS1, FOXM1, E2F1, E2F4, POU5F1, EKLF | cellular proliferation and cell cycle control, development |