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. 2020 Oct 23;10:18172. doi: 10.1038/s41598-020-75179-2

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Maximum-likelihood phylogenetic tree based on the alignment of core genome (genes n = 1953) performed using roary v3.12³⁹ and MAFFT of 276 S. aureus isolates obtained from bovine clinical and subclinical mastitis cases from 11 European countries. Dark and light grey shading displays Clonal Complex (CC), the outer ring represents the country of origin and the inner ring the clinical versus subclinical mastitis of each isolate. The phylogenetic tree was rooted with the CC22 clade and visualized using iTOL v3.6⁴¹.