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. 2020 Oct 23;10:18196. doi: 10.1038/s41598-020-75374-1

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Maximum likelihood phylogenetic tree (consensus of 1000 bootstrap replicates with 99% bootstrap support) of 57 near-full genome within host variants isolated from 14 subjects with DENV2 infection demonstrating clustering of variants by the host. Variants from each host is in the same color. In three subjects, only one variant was found. The relative abundance of the variant is given as a percentage next to variant name (e.g. 0.46 refers to a 46% abundance).