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. 2020 Oct 23;10(11):484. doi: 10.1007/s13205-020-02473-1

Table 2.

Gene set enrichment analysis of target genes based on GO categories (1) cellular component, (2) molecular function and (3) biological processes

Cellular component Total annotated genes in this class No of genes Percentage of genes Fold value p value (Bonferroni method)
Plasma membrane 3479 13 27.08333333 1.133555377 1
Cytosol 1178 13 27.08333333 3.347722423 0.062047052
Nucleoplasm 449 8 16.66666667 5.407513651 0.077139073
Cytoplasm 5684 32 66.66666667 1.707072486 0.07662906
Nucleus 5847 29 60.41666667 1.503955596 1
Extracellular 1825 15 31.25 2.493082014 0.420115356
Condensed nuclear chromosome 3 1 2.083333333 101.7128913 1
Chromosome passenger complex 3 1 2.083333333 101.7128913 1
Dynein complex 2 1 2.083333333 152.3163199 1
Molecular functions
Cytokine activity 107 3 6.25 10.61912371 0.638960909
Methyltransferase activity 59 3 6.25 19.25694677 0.114380528
Lipid kinase activity 35 3 6.25 32.45793855 0.024077901
Protein serine/threonine kinase activity 301 5 10.41666667 6.283525053 0.261224937
Metallopeptidase activity 101 4 8.333333333 14.9874087 0.032794018
Transcription factor activity 842 3 6.25 1.349571179 1
Oxidoreductase activity 161 1 2.083333333 2.368181983 1
Deacetylase activity 14 1 2.083333333 27.21634411 1
Receptor signalling protein tyrosine phosphatase activity 16 1 2.083333333 23.81642605 1
Biological processes
Protein metabolism 1323 7 14.58333333 2.000218678 1
Immune response 576 3 6.25 1.972690983 1
Regulation of cell cycle 57 2 4.166666667 13.30967968 1
Signal transduction 3934 18 37.5 1.728227217 1
Cell communication 3713 17 35.41666667 1.729421214 1
Nucleobase metabolism 2828 15 31.25 2.003652205 0.887230111
Apoptosis 220 1 2.083333333 1.73301188 1
Cell growth 1125 1 2.083333333 0.338912493 1
Cell cycle 22 1 2.083333333 17.32303243 1