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. 2020 Oct 21;14:1177932220965505. doi: 10.1177/1177932220965505

Table 2.

Recapitulating table details the size and bonds types of different residues between the targets (SARS-CoV-2 peak, GRP78) and the peptides (satpdb18674, satpdb18446, and satpdb12488, satpdb14438, and satpdb28899).

Peptide Target
Interaction residues
Peptides-GRP78
Interaction residues
Peptides-Spike
Peptide GRP78 Interaction size (A) interaction Types Peptide Spike
Interaction size (A) interaction Types
Region III Region IV
Satpdb12488 ASP-19 THR-434 2; 1.8; 2.6 O-NH; OH-O; O-O MET-5 TYR-473 1.8; OH-O
THR-2 VAL-429 2.5 NH-O PHE-4 TYR-473 3.2 OH-O
ASP-16 LYS-447 1.8; 2.7 NH-O. N-O THR-13 TYR-453 2.8 OH-O
ALA-17 LY-447 3.4 NH-NH ASP-16 TYR-453 3.8 OH-O
MET-5 SER-452 1.8, 2.6 OH-O; O-O THR-13 ARG-403 2.2 NH-O
2.3, 3.9 NH-O; O-O THR-2 ALA-475 3.4 O-O
PHE-4 SER-452 2.3 NH-O THR-3 ALA-475 3.7 O-O
TYR-15 TYR-505 3.6 OH-O
GLU-10 LYS-417 3.0 O-NH
Satpdb14438 ILE-13 THR-434 1.9 OH-O
2.9 O-O
SER-12 VAL-429 1.9; 2.9 NH-O; O-O
THR-9 THR-458 2.2; 3.1; 3.3 NH-O; N-N;O-O
Satpdb18446 TYR-3 THR-434 3.4 O-OH
ASN-4 VAL-429 1.9; 2.8 NH-O; O-N
TYR-3 GLN-449 2.6; 1.9; 3.6 NH-OH: NH-O
N-OH
VAL-1 SER-452 3.9 NH-NH
THR-10 SER-452 1.9; 2.8 O-OH; O-O
Satpdb18674 GLN-1 VAL-429 2.5; 2.5; 2.9 NH-NH; 2H-N SER-4 PRO-479 1.9; 2.8 OH-O; O-O
SER-4 GLN-449 2.1; 2.8 NH-O; N-O PHE-5 PRO-479 3.6 NH-O
THR-7 SER-452 3.2 NH-O SER-4 CYS-480 3.8 O-NH
SER-4 ASN-481 3.5 OH-O
TYR-2 ASN-481 2.0; 3 NH-O; O-N
PHE-5 PHE-486 2.9 NH-O
Satpdb28899 ASP-20 VAL-429 3.9 O-O ARG-1 GLU-484 2.2; 2.8; 3.4 NH-N; 2NH-O
LEU-19 VAL-429 2.9; 3.4 NH-O; O-N ASP-20 ARG-466 1.7; 2-6; NH-O; N-O
SER-16 THR-458 1.8; 2.6 OH-O; O-O LEU-19 ARG-466 3.6 NH-O
THR-15 THR-458 3.6 NH-O GLU-17 TYR-351 2.1; 3 OH-O; O-O
THR-15 TYR-351 3.7 OH-O
GLU-17 SER-349 2.9 OH-O
SER-16 ARG-346 2.0; 2.6 NH-O; N-O

Abbreviations: GRP78, glucose-regulating protein 78; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.