Table 3. Summary of plastid genome assemblies and gene annotations.
Species | Plastid genome size | LSC | IRb | SSC | IRa | Predicted genes | High- quality predictions | tRNAs | rRNAs |
---|---|---|---|---|---|---|---|---|---|
S. angustifolium | 151305 | 80790 | 26177 | 18161 | 26177 | 83 | 63 | 30 | 12 |
I. dichotoma | 153573 | 83071 | 26181 | 18140 | 26181 | 83 | 71 | 31 | 12 |
I. domestica | 153730 | 83137 | 26199 | 18195 | 26199 | 83 | 70 | 31 | 12 |
I. koreana | 153055 | 82579 | 26094 | 18288 | 26094 | 83 | 68 | 30 | 12 |
I. ensata | 150947 | 81514 | 25549 | 18335 | 25549 | 83 | 72 | 31 | 12 |
I. lactea | 152294 | 82159 | 26023 | 18089 | 26023 | 83 | 72 | 30 | 12 |
I. laevigata | 151081 | 81144 | 26022 | 17893 | 26022 | 83 | 71 | 31 | 12 |
I. minutoaurea | 150955 | 81516 | 25549 | 18341 | 25549 | 83 | 68 | 30 | 12 |
I. odaesanensis | 153620 | 82777 | 26784 | 17275 | 26784 | 83 | 68 | 31 | 12 |
I. pseudoacorus | 152562 | 82786 | 25948 | 17880 | 25948 | 83 | 73 | 31 | 12 |
I. rossii var. latifolia | 152654 | 82212 | 26183 | 18076 | 26183 | 83 | 71 | 31 | 12 |
I. rossii var. rossii | 153083 | 82635 | 26183 | 18082 | 26183 | 83 | 71 | 31 | 12 |
I. ruthenica | 152287 | 82311 | 25920 | 18136 | 25920 | 83 | 71 | 31 | 12 |
I. setosa | 152921 | 82900 | 26067 | 17887 | 26067 | 83 | 72 | 31 | 12 |
I. uniflora var. caricina | 152281 | 82307 | 25920 | 18134 | 25920 | 83 | 71 | 30 | 12 |
Mean (bp) | 152423.20 | 82255.87 | 26053.27 | 18060.80 | 26053.27 | 83.00 | 70.13 | 30.67 | 12 |
*LSC: long single copy section, IRa and IRb: inverted repeats, SSC: short single copy section