Table 2. Comparison of amino acids encoded by the envelope protein 1 gene of chikungunya virus strains isolated in this study with those of reference strains previously circulating in Myanmar and neighboring countries.
Strain | Amino acid position |
||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
208 | 209 | 210 | 211 | 212 | 213 | 214 | 215 | 216 | 217 | 218 | 219 | 220 | 221 | 222 | 223 | 224 | 225 | 226 | 227 | 228 | 229 | 230 | |
MN552435/Mdy86/Myanmar/2019* | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MN552436/Mdy66/Myanmar/2019* | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MN532437/Mdy192/Myanmar/2019* | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MN532438/Mdy176/Myanmar/2019* | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MN552439/Mdy153/Myanmar/2019* | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MN552440/Mdy124/Myanmar/2019* | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MN552441/Mdy542/Myanmar/2019* | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
KF590567/Mandalay/Myanmar/2010 | P | E | S | K | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | V | G | T | V | H |
KF590565/Mandalay/Myanmar/2010 | P | E | S | K | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | V | G | T | V | H |
MN114295/Thailand/2019 | P | E | S | K | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MN114293/Thailand/2019 | P | E | S | K | D | I | Y | A | N | T | Q | L | V | L | Q | R | P | A | V | G | T | V | H |
MN114344/Thailand/2019 | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MK848202/Thailand/2018 | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
FJ807895/Malaysia/2009 | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | S | A | G | T | V | H |
MG516711/Karachi/Pakistan/2016 | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | S | A | G | T | V | H |
MK473631/India/2016 | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MG912993/China/2017 | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
MK120198/Italy/2017 | P | E | S | E | D | V | Y | A | N | T | Q | L | V | L | Q | R | P | A | A | G | T | V | H |
*Strains isolated in this study.