Table 2.
MD Simulation Round 2, including 4 WT-ActKR-ligand complexes and 4 WT-HedKR-ligand complexes prepared through structure alignment, using DM-ActKR-(m-oct-pp) and DM-ActKR-(m-tet-p) co-crystal structures as templates.
Aligned to WT-ActKR Front-Patch [a][b] | Aligned to WT-ActKR Back-Patch [a][b] | ||
oct-pp | oct-p | tet-pp | tet-p |
Aligned to WT-HedKR front-patch | Aligned to WT-HedKR back-patch | ||
oct-pp | oct-p | tet-pp | tet-p |
[a] Each DM-ActKR-ligand pair were simulated in triplicate. [b] Ligand nomenclatures are the same as Table 1.