Skip to main content
. 2020 Oct 21;21(20):7799. doi: 10.3390/ijms21207799
PTC peptidyl transferase center
FDA U.S. Food and Drug Administration
cryo-EM cryogenic electron microscopy
NMR nuclear magnetic resonance
rf radiofrequency
FID free induction decay
FT Fourier transformation
MD molecular dynamics
NPET nascent peptide exit tunnel
MABP-1 macrolide antibiotic binding protein-1
SEM scanning electron microscopy
SPA single-particle analysis
cryo-ET cryogenic electron tomography
ErmBL erythromycin resistance methyltransferase B leader peptide
ErmCL erythromycin resistance methyltransferase C leader peptide
ermaa-tRNA erythromycin resistance methyltransferase geneaminoacyl-tRNA
p-tRNA peptidyl-tRNA
TnaCMsrE tryptophanase leader peptide
RSF macrolide-streptogramin B resistance proteinribosomal silencing factor
ABC ATP-binding cassette
NOE nuclear Overhauser effect
STD saturation transfer difference
trNOESY transferred nuclear Overhauser effect spectroscopy
DOSY diffusion-ordered NMR spectroscopy
PREs paramagnetic relaxation enhancements
ROESY rotating frame nuclear Overhauser effect spectroscopy
SDS sodium dodecylsulphate
DPC dodecylphosphocholine
BSA bovine serum albumin
MRSA methicillin-resistant Staphylococcus aureus
MAS magic angle spinning
DOPC dioleoylphosphatidylcholine
ESR electron spin resonance
DMPC 1,2-dimyristoyl-sn-glycero-3-phosphocholine
DMPG 1,2-dimyristoyl-sn-glycero-3-phosphorylglycerol
SAR structure-activity relationship
RDC residual dipolar couplings
DMS dimethyl sulfate
CMCT 1-cyclohexyl-3-(2-morpholinoethyl) carbodiimide metho-p-toluene sulfonate
F fluorophore
FRET Förster resonance energy transfer
QM quantum mechanical
AMBER Assisted Model Building and Energy Refinement
pBLCLZα erythromycin-inducible ermC-β-galactosidase
CHARMM Chemistry at HARvard Macromolecular Mechanics
PES potential energy surface
ffTK force field toolkit
VMD variable molecular dynamics
GCMC grand canonical Monte Carlo
MMFF Merck Molecular Force Field
MOE MOELowModeMD
MC MacroModel