| PTC | peptidyl transferase center |
| FDA | U.S. Food and Drug Administration |
| cryo-EM | cryogenic electron microscopy |
| NMR | nuclear magnetic resonance |
| rf | radiofrequency |
| FID | free induction decay |
| FT | Fourier transformation |
| MD | molecular dynamics |
| NPET | nascent peptide exit tunnel |
| MABP-1 | macrolide antibiotic binding protein-1 |
| SEM | scanning electron microscopy |
| SPA | single-particle analysis |
| cryo-ET | cryogenic electron tomography |
| ErmBL | erythromycin resistance methyltransferase B leader peptide |
| ErmCL | erythromycin resistance methyltransferase C leader peptide |
| ermaa-tRNA | erythromycin resistance methyltransferase geneaminoacyl-tRNA |
| p-tRNA | peptidyl-tRNA |
| TnaCMsrE | tryptophanase leader peptide |
| RSF | macrolide-streptogramin B resistance proteinribosomal silencing factor |
| ABC | ATP-binding cassette |
| NOE | nuclear Overhauser effect |
| STD | saturation transfer difference |
| trNOESY | transferred nuclear Overhauser effect spectroscopy |
| DOSY | diffusion-ordered NMR spectroscopy |
| PREs | paramagnetic relaxation enhancements |
| ROESY | rotating frame nuclear Overhauser effect spectroscopy |
| SDS | sodium dodecylsulphate |
| DPC | dodecylphosphocholine |
| BSA | bovine serum albumin |
| MRSA | methicillin-resistant Staphylococcus aureus |
| MAS | magic angle spinning |
| DOPC | dioleoylphosphatidylcholine |
| ESR | electron spin resonance |
| DMPC | 1,2-dimyristoyl-sn-glycero-3-phosphocholine |
| DMPG | 1,2-dimyristoyl-sn-glycero-3-phosphorylglycerol |
| SAR | structure-activity relationship |
| RDC | residual dipolar couplings |
| DMS | dimethyl sulfate |
| CMCT | 1-cyclohexyl-3-(2-morpholinoethyl) carbodiimide metho-p-toluene sulfonate |
| F | fluorophore |
| FRET | Förster resonance energy transfer |
| QM | quantum mechanical |
| AMBER | Assisted Model Building and Energy Refinement |
| pBLCLZα | erythromycin-inducible ermC-β-galactosidase |
| CHARMM | Chemistry at HARvard Macromolecular Mechanics |
| PES | potential energy surface |
| ffTK | force field toolkit |
| VMD | variable molecular dynamics |
| GCMC | grand canonical Monte Carlo |
| MMFF | Merck Molecular Force Field |
| MOE | MOELowModeMD |
| MC | MacroModel |