Table 1.
Sample ID | Lab ID | Origin | Year sampled | Inferred sex | Sequencing effort | Coverage (PfG) | Coverage (Mallard Duck) |
---|---|---|---|---|---|---|---|
SWE01 | P7752_101 | Swedish | 2010 | M | 80.5 | 15.72 | 13.4 |
SWE02 | P7752_102 | Swedish | 2010 | M | 78.92 | 12.05 | 10.23 |
SWE03 | P7752_103 | Swedish | 2010 | F | 79.65 | 13.5 | 11.54 |
SWE04 | P7752_104 | Swedish | 2010 | M | 81.27 | 12.21 | 10.44 |
SWE05 | P7752_105 | Swedish | 2010 | M | 79 | 13.69 | 11.65 |
SWE06 | P7752_106 | Swedish | 2010 | M | 80.97 | 12.39 | 10.59 |
SWE07 | P7752_107 | Swedish | 2010 | F | 80.3 | 16.59 | 14.13 |
SWE08 | P7752_108 | Swedish | 2010 | F | 80.41 | 14.5 | 12.35 |
SWE09 | P7752_109 | Swedish | 2010 | M | 77.9 | 10.25 | 8.69 |
SWE10 | P7752_110 | Swedish | 2010 | F | 78.48 | 18.57 | 15.83 |
SWE11 | P7752_111 | Swedish | 2015 | F | 78.84 | 16.1 | 13.76 |
SWE12 | P7752_112 | Swedish | 2016 | F | 79.99 | 15.7 | 13.43 |
RUS13 | P7752_113 | Russian | 2007 | F | 79.18 | 14.24 | 12.15 |
RUS14 | P7752_114 | Russian | 2009 | F | 77.84 | 16.59 | 14.13 |
RUS15 | P7752_115 | Russian | 2007 | M | 79.28 | 25.45 | 21.82 |
RUS16 | P7752_116 | Russian | 2009 | M | 81.75 | 14.32 | 12.28 |
RUS17 | P7752_117 | Russian | 2010 | F | 78.22 | 15 | 12.72 |
NOR19 | P7752_119 | Norwegian | 2000 | F | 79.75 | 21.25 | 18.05 |
NOR20 | P7752_120 | Norwegian | 2000 | F | 79.87 | 17.61 | 15.03 |
NOR21 | P7752_121 | Norwegian | 2000 | M | 79.28 | 21.73 | 18.47 |
NOR22 | P7752_122 | Norwegian | 2000 | M | 78.7 | 21.44 | 18.19 |
Per sample sequencing effort (in millions of reads) and average genomic coverage (x, after filtering by MQ > 30) when mapped to PfG and the mallard duck are detailed.