TABLE 3.
RT-qPCR primers
| Target | Fwd primer | Rev primer |
|---|---|---|
| HSV-1 RL2 | GTCGCCTTACGTGAACAAGAC | GTCGCCATGTTTCCCGTCTG |
| HSV-1 RS1 | CGGTGATGAAGGAGCTGCTGTTGC | CTGATCACGCGGCTGCTGTACA |
| HSV-1 UL29 | CATCAGCTGCTCCACCTCGCG | GCAGTACGTGGACCAGGCGG |
| HSV-1 UL30 | CATCACCGACCCGGAGAGGGAC | GGGCCAGGCGCTTGTTGGTG |
| HSV-1 UL8 | GGTGATGAGCGCAGTCC | GTCGTGCGTGTCTGTCC |
| HSV-1 US6 | TGTCGTCATAGTGGGCCTCCAT | AGACTTGTTGTAGGAGCATTCG |
| HSV-1 US9 | ACTCGGAAAGCGAAGACGAG | CGTCGACGCCTTAATACCGA |
| HSV-1 UL20 | ACCATCTCCAACGGCTTCAG | CCATACCCAGCCGGTCTTTT |
| HSV-1 VP16 | TCGGCGTGGAAGAAACGAGAGA | CGAACGCACCCAAATCGACA |
| HSV-1 UL17 | ACTGACGTCACCATCCATCG | ACTACAGCACAAGCGGAGAC |
| Human HPRT | CCTGGCGTCGTGATTAGTGAT | AGACGTTCAGTCCTGTCCATAA |
| RS1 CBS ChIP | GTGGACCGCTTCCTG | ATGTCGGCCATCCAG |
| UL8 CBS ChIP | GTGCGTTCCGGCAAC | TGGCCCATGATGCAG |
| US6 CBS ChIP | CCCCAATAAAGATCGCGGTAG | TACCCCTCCTCCTCGTAAAATG |
| UL20 CBS ChIP | GAGGAAGGTCATCCCGCATG | CAAGAACCCGGGTGTCTTTGATC |
| HSV Neg ChIP | CAAACACTTGGGGACTGTAGGTTTCTG | GGTCTCGTAACGCCAATCAAGATCG |