TABLE 2.

Pairwise comparison of the whole-genome sequence between Malaysian isolate of OrNV (Ma07) and consensus sequences of other geographical populations of OrNV

Sample identifier	SI 1	SI 2	PHI 1	PHI 2	PHI 3	PNG 1	PNG 2	PNG 3	PNG 4	Fiji 1	Fiji 2	Ma 07
SI 1		96a	382	453	405	508	513	506	492	531	534	513
SI 2	99.92b		394	449	367	492	515	509	501	496	528	475
PHI 1	99.70	99.69		482	309	527	526	515	563	546	546	527
PHI 2	99.65	99.65	99.62		484	561	580	588	640	640	614	550
PHI 3	99.68	99.71	99.76	99.62		540	517	522	560	501	533	482
PNG 1	99.60	99.61	99.59	99.56	99.58		132	158	194	424	419	449
PNG 2	99.60	99.60	99.59	99.55	99.60	99.90		103	178	403	384	478
PNG 3	99.60	99.60	99.60	99.54	99.59	99.88	99.92		174	396	374	478
PNG 4	99.61	99.61	99.56	99.50	99.56	99.85	99.86	99.86		449	446	532
FIJI 1	99.58	99.61	99.57	99.50	99.61	99.67	99.68	99.69	99.65		104	475
FIJI 2	99.58	99.59	99.57	99.52	99.58	99.67	99.70	99.71	99.65	99.92		479
Ma 07	99.60	99.63	99.59	99.57	99.62	99.65	99.63	99.63	99.58	99.63	99.62

^aUpper comparisons represent the numbers of single nucleotide differences between isolates.

^bLower comparisons are the percentages of similarity between individual isolates.