Table 1. IFM differentially abundant matrisome and matrisome-associated proteins through development organised by highest mean condition (p<0.05, fold change ≥2).
Proteins are arranged into colour-coded divisions and categories. Bar graphs profile the relative abundance of each protein at each development stage, a foetus, b 0 days, c 0–1 month, d 3–6 months, e 1–2 years, with the development age reporting the highest mean protein level also specified.
Table 1—source data 1. IFM and fascicle matrisome proteins intensity.
elife-58075-table1-data1.xlsx (13.3KB, xlsx)
| Protein | Division | Category | Highest mean cond. | a b c d e |
|---|---|---|---|---|
| SERPINH1 | Matrisome-associated | ECM Regulators | Foetus |  |
| COL14A1 | Core matrisome | Collagens | 0–1 month |  |
| ASPN | Core matrisome | Proteoglycans | 0–1 month |  |
| FMOD | Core matrisome | Proteoglycans | 0–1 month |  |
| KERA | Core matrisome | Proteoglycans | 0–1 month |  |
| FBLN5 | Core matrisome | ECM Glycoproteins | 0–1 month |  |
| FGB | Core matrisome | ECM Glycoproteins | 0–1 month |  |
| FGG | Core matrisome | ECM Glycoproteins | 0–1 month |  |
| COL1A2 | Core matrisome | Collagens | 3–6 months |  |
| COL2A1 | Core matrisome | Collagens | 3–6 months |  |
| COL4A1 | Core matrisome | Collagens | 3–6 months |  |
| COL4A2 | Core matrisome | Collagens | 3–6 months |  |
| COL6A3 | Core matrisome | Collagens | 3–6 months |  |
| BGN | Core matrisome | Proteoglycans | 3–6 months |  |
| HSPG2 | Core matrisome | Proteoglycans | 3–6 months |  |
| ADIPOQ | Core matrisome | ECM Glycoproteins | 3–6 months |  |
| FBN1 | Core matrisome | ECM Glycoproteins | 3–6 months |  |
| FN1 | Core matrisome | ECM Glycoproteins | 3–6 months |  |
| LAMB2 | Core matrisome | ECM Glycoproteins | 3–6 months |  |
| LAMC1 | Core matrisome | ECM Glycoproteins | 3–6 months |  |
| NID1 | Core matrisome | ECM Glycoproteins | 3–6 months |  |
| ANXA4 | Matrisome-associated | ECM-affiliated | 3–6 months |  |
| S100A4 | Matrisome-associated | Secreted Factors | 3–6 months |  |
| COL21A1 | Core matrisome | Collagens | 1–2 years |  |
| COL3A1 | Core matrisome | Collagens | 1–2 years |  |
| COL5A1 | Core matrisome | Collagens | 1–2 years |  |
| COL5A2 | Core matrisome | Collagens | 1–2 years |  |
| COL6A1 | Core matrisome | Collagens | 1–2 years |  |
| COL6A2 | Core matrisome | Collagens | 1–2 years |  |
| DCN | Core matrisome | Proteoglycans | 1–2 years |  |
| LUM | Core matrisome | Proteoglycans | 1–2 years |  |
| OGN | Core matrisome | Proteoglycans | 1–2 years |  |
| PRELP | Core matrisome | Proteoglycans | 1–2 years |  |
| COMP | Core matrisome | ECM Glycoproteins | 1–2 years |  |
| DPT | Core matrisome | ECM Glycoproteins | 1–2 years |  |
| TGFBI | Core matrisome | ECM Glycoproteins | 1–2 years |  |