Skip to main content
. 2020 Sep 30;10(20):11488–11506. doi: 10.1002/ece3.6786

Table 2.

Performance assessment of the gridSearch compared to the optimizeModel function for model tuning regarding execution time (expressed as HH:MM:SS) and evaluation metric (on the training dataset “Train AUC,” the validation dataset “Val AUC,” given as arithmetic mean across the folds of a 10‐fold cross‐validation) for the four methods implemented in SDMtune

Method Default model Genetic algorithm Grid search
Train AUC Val AUC Train AUC Val AUC Time Train AUC Val AUC Time
ANN 0.8600 0.8619 0.9839 0.9590 00:11:44 0.9814 0.9615 05:51:33
BRT 0.9873 0.9750 0.9905 0.9779 00:01:33 0.9892 0.9787 00:29:45
RF 1 0.9724 1 0.9740 00:02:16 1 0.9735 00:48:03
Maxnet 0.8681 0.8561 0.8710 0.8565 00:17:49 0.8702 0.8567 05:01:21

Models were trained using the virtualSp dataset available with the package and 1200 possible hyperparameters' combinations. Presence and background locations were used for the Maxnet method, presence and absence locations for the other methods.