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. 2020 Oct 28;10:193. doi: 10.1186/s13568-020-01132-1

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 3 — Comparative genome analysis of Pseudomonas strains. a, b Number of shared genes and unique genes in genomes and of P. protegens XY2F4, P. donghuensis 22G5, P. putida 25E1 and P. lini 25D11 and their type strains. c, d Number of unique genes in P. protegens XY2F4XY2F4 and P. donghuensis 22G5 when compared with published strains from the same species (with NCBI accessions). e Presence of selected gene clusters for biosynthesis of antibiotics, cyclic lipopeptides (CLP), siderophores, insecticidal toxins, exoenzymes, secretion systems, and chemicals for bacteria-to-environment communication. Colored box/blank box indicates the presence/absence of selected gene clusters, respectively. Numbers within boxes represent the predicted number of gene clusters encoded for the corresponding products