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. 2020 Oct 18;21(20):7702. doi: 10.3390/ijms21207702
3D Three-dimensional
AA All-atom
CAZy Carbohydrate-Active Enzyme
CD Cluster of Differentiation
CFG Consortium for Functional Glycomics
CG Coarse-grained
CHI Carbohydrate Intrinsic
CRD Carbohydrate Recognition Site
Cryo-EM Electron cryo-microscopy
CSD Cambridge Structural Database
DFT Density Functional Theory
FUC α-L-fucopyranose
GAG Glycosaminoglycan
GAMD Gaussian Accelerated MD
GBP Glycan-Binding Protein
GM9 Glc1Man9GlcNAc2
HPLC High Performance Liquid Chromatography
HREX Hamiltonian Replica-Exchange MD
INIOM Our own N-layered integrated molecular orbital and molecular mechanics
LNB Lacto-N-biose I
MD Molecular Dynamics
MM Molecular Mechanics
MS Mass-spectrometry
msesMD Multidimensional swarm-enhanced sampling MD
NAG 2-acetamido-2-deoxy-β-D-glucopyranose
NMR Nuclear Magnetic Resonance
NOE Nuclear Overhauser Effect
PDB Protein Data Bank
PDBe Protein Data Bank Europe
PDBj Protein Data Bank Japan
PDBsum Database of Structural Summaries of PDB Entries
QM Quantum Mechanics
RCSB PDB Research Collaboratory for Structural Bioinformatics Protein Data Bank
REMD Replica-exchange MD
SNFG Symbol Nomenclature for Glycans
UniProtKB UniProt Knowledgebase
wwPDB Worldwide Protein Data Bank