FIG 6.

Phylogenetic trees of 446 P. aeruginosa samples (A) based on core genome SNPs and (B) based on gene presence-absence. The color of the outer circle of the trees denotes clone type, and the inner circle denotes the patient. Blue circles denote the position of reference genomes. The phylogenetic trees can be accessed on the Microreact webserver at https://microreact.org/project/KYbEXuFS0 (phylogenetic tree based on core genome SNP distances) and https://microreact.org/project/BkZdRqP-E (phylogenetic tree based on gene differences).