Table 3.
Results of the VOGdb and PFAM HMM analysis. Light pink: phage-like sequences. Grey: nonviral sequences; Light blue: DNA virus-like sequences; Orange: RNA virus-like sequences. Abund: expected read counts estimated using the RSEM program.
| Contig Name | ORF | Abund. | Viral Hit | e-Value | Viral Hit Description | Viral-Like Hit Taxonomy | PFAM Hit ID |
PFAM
e-Value |
PFAM Hit Description |
|---|---|---|---|---|---|---|---|---|---|
| ALG_2_DN19089_c0_g1_i1_len4252 | ORF_1 | 4717 | VOG03062 | 1.00 × 1012 | REFSEQ hypothetical protein | Bacteriophage | - | - | - |
| ALG_2_DN19089_c0_g1_i1_len4252 | ORF_1 | 4717 | PF00680.20 | 2.70 × 105 | RNA dependent RNA polymerase | RdRP-1 | - | - | - |
| ALG_2_DN19250_c2_g3_i5_len1869 | ORF_1 | 743.91 | VOG23558 | 1.00 × 104 | REFSEQ hypothetical protein | Caudovirales; Siphoviridae | - | - | - |
| ALG_2_DN18568_c0_g1_i1_len2977 | ORF_1 | 511 | VOG10478 | 1.30 × 106 | sp|Q05224|VG18 BPML5 Gene 18 protein | Bacteriophage | - | - | - |
| ALG_2_DN19013_c0_g1_i2_len1689 | ORF_2 | 224.31 | VOG22975 | 1.40 × 104 | REFSEQ carboxylesterase | Caudovirales; Siphoviridae | - | - | - |
| ALG_2_DN19410_c0_g2_i6_len1950 | ORF_1 | 183.94 | VOG12013 | 5.20 × 104 | sp|P03778|Y06 BPT7 Protein 0.6B | Viruses | PF16752.5 | 1.50 × 104 | Tubulin-specific chaperone C |
| ALG_2_DN18226_c0_g1_i1_len1259 | ORF_1 | 157.61 | VOG09820 | 2.90 × 104 | REFSEQ hypothetical protein | Phycodnaviridae; Chlorovirus | - | - | - |
| ALG_2_DN18993_c2_g2_i2_len2532 | ORF_1 | 151.17 | VOG08344 | 8.50 × 108 | REFSEQ hypothetical protein | Bacteriophage | PF13424.6 | 3.80 × 10132 | Tetratricopeptide repeat |
| ALG_3_DN34624_c0_g1_i1_len2077 | ORF_2 | 146 | PF02123.16 | 8.50 × 105 | Viral RNA-directed RNA-polymerase | RdRP-4 | - | - | - |
| ALG_2_DN18744_c0_g1_i3_len2080 | ORF_1 | 134.99 | VOG10472 | 4.10 × 104 | REFSEQ hypothetical protein | Poxviridae | - | - | - |
| ALG_2_DN19214_c2_g1_i7_len1432 | ORF_2 | 118 | VOG06927 | 6.90 × 104 | REFSEQ hypothetical protein | Bacteriophage | - | - | - |
| ALG_3_DN25592_c0_g1_i1_len1043 | ORF_1 | 115 | VOG01256 | 4.40 × 104 | sp|Q9QU29|ORF3 TTVB1 Uncharacterized ORF3 protein | dsDNA viruses | - | - | - |
| ALG_2_DN18451_c0_g1_i4_len2061 | ORF_4 | 109.48 | VOG17696 | 7.10 × 104 | REFSEQ hypothetical protein | Bacteriophage | PF16058.5 | 1.80 × 1017 | Mucin-like |
| ALG_2_DN18451_c0_g1_i4_len2061 | ORF_4 | 109.48 | VOG17696 | 7.10 × 104 | REFSEQ_hypothetical_protein | Bacteriophage | PF16058.5 | 1.10 × 107 | Mucin-like |
| ALG_2_DN18732_c0_g2_i2_len2454 | ORF_2 | 99.65 | VOG09815 | 1.70 × 1015 | REFSEQ hypothetical protein | Phycodnaviridae; Chlorovirus | - | - | - |
| ALG_2_DN18957_c0_g1_i1_len1408 | ORF_2 | 97.98 | VOG02199 | 8.40 × 104 | sp|Q5UR09|YR648 MIMIV Uncharacterized protein R648 | Ortervirales | PF06156.13 | 4.70 × 104 | Initiation control protein YabA |
| ALG_2_DN18957_c0_g1_i2_len1657 | ORF_2 | 89.04 | VOG02199 | 3.50 × 104 | sp|Q5UR09|YR648 MIMIV Uncharacterized protein R648 | Ortervirales | PF06156.13 | 2.20 × 104 | Initiation control protein YabA |
| ALG_2_DN19250_c2_g3_i3_len2203 | ORF_1 | 71.48 | VOG23558 | 7.80 × 105 | REFSEQ hypothetical protein | Caudovirales; Siphoviridae | - | - | - |
| ALG_2_DN19410_c0_g2_i7_len1634 | ORF_1 | 49.51 | VOG12013 | 9.90 × 104 | sp|P03778|Y06 BPT7 Protein 0.6B | Bacteriophage | - | - | - |
| ALG_2_DN11543_c0_g1_i1_len842 | ORF_1 | 42 | VOG20356 | 3.80 × 104 | REFSEQ hypothetical protein | Caudovirales; Myoviridae | - | - | - |
| ALG_2_DN19463_c5_g2_i1_len765 | ORF_1 | 37.7 | VOG24589 | 2.60 × 105 | REFSEQ hypothetical protein | Caudovirales; Siphoviridae | - | - | - |
| ALG_2_DN19174_c0_g2_i18_len938 | ORF_1 | 36.39 | VOG10625 | 9.70 × 104 | sp|Q05293|VG78 BPML5 Gene 78 protein | Bacteriophage | - | - | - |
| ALG_2_DN41289_c0_g1_i1_len750 | ORF_1 | 36 | VOG06662 | 9.50 × 105 | REFSEQ Cupin | Bacteriophage | - | - | - |
| ALG_2_DN22182_c0_g1_i1_len820 | ORF_1 | 35 | VOG02199 | 1.50 × 104 | sp|Q5UR09|YR648 MIMIV Uncharacterized protein R648 | Ortervirales | PF06156.13 | 7.20 × 104 | Initiation control protein YabA |
| ALG_2_DN44027_c0_g1_i1_len815 | ORF_1 | 33.98 | VOG21678 | 3.70 × 104 | REFSEQ hypothetical protein | Caudovirales; Myoviridae | PF08614.11 | 6.00 × 105 | Autophagy protein 1(ATG16) |
| ALG_2_DN594_c0_g2_i1_len711 | ORF_1 | 28 | PF17501.2 | 2.80 × 104 | Viral RNA-directed RNA polymerase | Viral_RdRp_C | - | - | - |
| ALG_2_DN14271_c0_g1_i1_len772 | ORF_1 | 25.12 | VOG18617 | 2.20 × 104 | REFSEQ hypothetical protein | Caudovirales; Siphoviridae | PF13855.6 | 1.60 × 1021 | Leucine rich repeat |
| ALG_2_DN18993_c2_g2_i1_len2178 | ORF_1 | 21.18 | VOG08344 | 4.70 × 107 | REFSEQ hypothetical protein | Bacteriophage | PF13374.6 | 1.40 × 10126 | 1Tetratricopeptide repeat |
| ALG_2_DN44027_c0_g1_i2_len783 | ORF_1 | 19.02 | VOG21678 | 3.60 × 104 | REFSEQ hypothetical protein | Caudovirales; Myoviridae | PF08614.11 | 7.70 × 105 | Autophagy protein 1(ATG16) |
| ALG_2_DN19463_c5_g2_i6_len928 | ORF_1 | 14.34 | VOG24589 | 6.40 × 105 | REFSEQ hypothetical protein | Caudovirales; Siphoviridae | - | - | - |
| ALG_2_DN19463_c5_g2_i4_len863 | ORF_1 | 4.36 | VOG24589 | 5.30 × 105 | REFSEQ hypothetical protein | Caudovirales; Siphoviridae | - | - | - |