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. 2020 Oct 28;52:64. doi: 10.1186/s12711-020-00583-1

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 5 — Statistical significance of additive, dominance and ROH effects for yield traits from single SNP GWAS. MY: 305-day milk yield; FY: 305-day fat yield; PY: 305-day protein yield. The horizontal red line is a threshold based on 10% false-discovery rate (absence of this line implies that all effects were below the threshold). The y-axis for MY additive effects was truncated at 40; in the peak on chromosome 14, there were 6 SNPs with a -log₁₀(P-value) ranging from 40 to 94