Table 2. Significant eigenGWAS underlying Fraser River kokanee and sockeye ecotypes.
| Chromosome/Scaffold | Position | Candidate Gene Symbol | Accession |
|---|---|---|---|
| 9a | 27555132 | SEPT7† | LOC115134365 |
| 20 | 20896927 | PLXNA2†* | LOC115102444 |
| 21 | 10837054 | C3* | LOC115103919 |
| 22 | 5976979 | CPA6* | cpa6 |
| 22 | 51934852 | P2RX5† | LOC115105525 |
| 23 | 6251055 | PDE6C | LOC115106380 |
| 25 | 30482158 | sspn† | sspn |
| NW_021803831.1 | 67980 | unknown | NA |
| NW_021814461.1 | 17077 | SMARCAL1 | LOC115126495 |
† Closest candidate gene to lowest p-value variant, but not well supported.
* Genes related to ammonia tolerance [102].