Table 1.
The function of 6mA and 5hmrC modification in different multicellular organisms
Modification | Multicellular organism | Function | Correlation with gene expression | Reference |
---|---|---|---|---|
6mA | A. thaliana | protein coding gene regulation | activation | Liang et al. 2018 |
B. mori | regulates cell cycle progression | repression | Wang et al. 2018 | |
C. elegans | gene regulation, regulation of stress response, transgenerational inheritance | activation |
Greer et al. 2015 Ma et al. 2019 |
|
D. melanogaster | regulates transposon expression in ovary regulates neuronal gene expression in brains regulates transcription in whole fly |
activation repression repression |
Zhang et al. 2015 Yao et al. 2018 Shah et al. 2019 |
|
D. rerio and S. scrofa | involved in embryogenesis, activation of repetitive elements | activation | Liu et al. 2016 | |
H. sapiens | prevents tumorigenesis | activation | Xiao et al. 2018 | |
M. musculus | regulates expression of neuronal genes and LINE transposon expression in stress condition | repression | Yao et al. 2017 | |
O. sativa | gene regulation, repression of transposable element-related genes | gene-dependent | Zhou et al. 2018 | |
T. thermophile | contributes to nucleosome positioning | gene-dependent | Wang et al. 2017 | |
X. laevis | regulates transcription, nucleic acid binding, metabolic processes, cell adhesion and ATP binding activity | N/A | Koziol et al. 2016 | |
5hmrC | D. melanogaster | regulates embryogenesis/development | gene-dependent | Delatte et al. 2016 |
M. musculus | decrease detected in model of Parkinson’s disease | N/A | Miao et al. 2016 | |
M. musculus and H. sapiens | regulates gene expression | N/A | Fu et al. 2014 |
Abbreviations
5mC: 5-methylcytosine
5hmC: 5-hydroxylmethylcytosine
TET: Ten-eleven Translocation
DNMT: DNA methyltransferase