Table 1.
Amino acid sequences from pathogens and vaccines considered in this study.
| Pathogen | NCBI Accession | Proteins/CDS |
|---|---|---|
| Mumps virus (MuV) | NC_002200 | 8 |
| Measles virus (MV) | NC_001498 | 8 |
| Rubella Virus (RuV) | NC_001545 | 2 |
| Hepatitis B virus (HBV) | NC_003977 | 8 |
| Varicella Zoster Virus (VZV) | NC_001348 | 73 |
| Polio Virus (PoV) | NC_002058 | 1 |
| Influenza A virus (IAV) | NC_026422 … NC_026429 | 12 |
| Influenza B virus (IBV) | NC_002204… NC_002211 | 10 |
| Rotavirus A (RTV) | NC_011500 … NC_011510 | 12 |
| Papilloma Virus (PaV) | NC_027779 | 6 |
| Herpes simplex virus 1 (HSV1) | NC_001806 | 77 |
| Herpes simplex virus 2 (HSV2) | NC_001798 | 77 |
| Epstein–Barr virus (EBV) | NC_007605 | 94 |
| human cytomegalovirus (HCMV) | NC_006273 | 169 |
| human rhinovirus A (HRVA) | NC_038311 | 1 |
| human rhinovirus B (HRVB) | NC_038312 | 1 |
| human rhinovirus C (HRVC) | NC_009996 | 1 |
| Human immunodeficiency 1 (HIV1) | NC_001802 | 10 |
| bacille Calmette–Guérin (BCG) | NC_008769 | 3,807 |
| Bordetella pertussis (Bpe) | NC_002929 | 3,359 |
| Corynebacterium diphtheriae (Cdi) | NZ_LN831026 | 2,171 |
| Clostridium tetani (Cte) | NC_004557& NC_004565 | 2,725 |
| Haemophilus influenzae (Hin) | NC_000907 | 1,597 |
| Neisseria meningitidis (serogroup B) (Nme) | NC_003112 | 1,960 |
| Streptococcus pneumoniae (Spn) | NC_003098 | 1,821 |
| Vaccine Antigens | PRIDE PROJECT | Proteins/CDS |
| Tetanus (T): C. tetani | PXD009289, PXD013804 | 601 |
| Diphteria (D): C. diphtheriae | PXD009289, PXD013804 | 340 |
| Acellular pertussis (aP): B. pertussis | PXD013804 | 25 |
| Whole pertussis (wP): B. pertussis | PXD013804 | 1852 |
| Meningococcal B (MenB): N. meningitidis | PXD011622 | 267 |