Table 3.
SNP | Genotype frequencies(n) |
Allelic frequencies |
P-value4 | Genetic polymorphism |
|||||
---|---|---|---|---|---|---|---|---|---|
AA | AB | BB | A | B | PIC1 | He2 | Ne3 | ||
g.958 G > A | 0.57 (181) | 0.35 (112) | 0.08 (24) | 0.75 | 0.25 | 0.60 | 0.31 | 0.38 | 1.61 |
g.1374 G > C | 0.62 (197) | 0.30 (96) | 0.08 (24) | 0.77 | 0.23 | 0.29 | 0.29 | 0.35 | 1.54 |
g.1393 G > A | 0.75 (240) | 0.20 (62) | 0.05 (15) | 0.85 | 0.15 | 0.25 | 0.22 | 0.25 | 1.33 |
g.1817 C > T | 0.08 (190) | 0.30 (102) | 0.62 (25) | 0.23 | 0.77 | 0.22 | 0.29 | 0.36 | 1.55 |
g.1918G > A | 0.61 (194) | 0.31 (97) | 0.08 (26) | 0.77 | 0.23 | 0.29 | 0.29 | 0.36 | 1.56 |
Abbreviation: SNP, single nucleotide polymorphism.
Numbers in parentheses indicated the number of individuals.
PIC: polymorphism information content.
He: gene heterozygosity.
Ne: effective number of alleles.
The test of Hardy–Weinberg equilibrium P-value> 0.05 suggested the population conforms to Hardy–Weinberg equilibrium.