Table 3.
Overview of sequencing results of samples.
Item | Proventriculus | Gizzard | Duodenum | Jejunum | Ileum | Cecum | Rectum |
---|---|---|---|---|---|---|---|
Sequencing number | 67,922 ± 5,807a,b | 68,534 ± 7,053a,b | 66,680 ± 9,537b | 70,271 ± 6,687a | 70,975 ± 10,530a | 66,350 ± 6,766b | 69,812 ± 7,748a |
OTU | 903 ± 177 | 787 ± 174 | 767 ± 135 | 812 ± 178 | 843 ± 225 | 857 ± 122 | 739 ± 117 |
Chao1 | 943 ± 187a | 825 ± 184b | 796 ± 162b | 847 ± 184b | 895 ± 291a,b | 909 ± 144a,b | 792 ± 129b |
ACE | 948 ± 189a | 842 ± 193a,b | 816 ± 158b | 868 ± 190a,b | 917 ± 304a | 926 ± 153a | 810 ± 127b |
Shannon | 5.82 ± 0.50a | 4.96 ± 1.17b | 4.65 ± 1.61b | 4.67 ± 1.42b | 4.23 ± 1.39b | 5.90 ± 0.65a | 40.46 ± 0.96b |
Simpson | 0.94 ± 0.03a | 0.86 ± 0.13a,b | 0.80 ± 0.22a,b | 0.82 ± 0.20a,b | 0.77 ± 0.19b | 0.94 ± 0.04a | 0.83 ± 0.12a,b |
Good's coverage | 0.9948 | 0.9953 | 0.9955 | 0.9948 | 0.9944 | 0.9949 | 0.9952 |
Means in the same row with different superscript letters differ significantly (P < 0.05).
Abbreviations: ACE, abundance-base coverage estimator; OTU, operational taxonomic units.