Table 1.
Primer sequences for real-time PCR.
| Gene | Primers | Sequence (5′-3′) |
|---|---|---|
| Housekeeping | gdhA | Forward 5′-GGAATTGATGTGGCGTTAG-3′ |
| Reverse 5′-GTGTTGCACATGGTAACG-3′ | ||
| Endocarditis and biofilm-associated Ebp pilus subunits | ebpA | Forward: 5′-CTACGACACTCTTGCTGGAA-3′ Reverse: 5′-AATTTCGCTCCTTTAAGTGG-3′ |
| ebpB | Forward: 5′-AACAGAAATTCCTTTTACGG-3′ | |
| Reverse: 5′-ATAGCCAAATGACTACCAGC-3′ | ||
| ebpC | Forward: 5′-TTGAAGTGGTGACAGGTGGG-3′ | |
| Reverse: 5′-GCTGCTTTCGTTGTTTCATC-3′ | ||
| Epa polysaccharide synthesis | epaA | Forward: 5′-TTGCATCACCGCTTGTTATC-3′ Reverse: 5′-TCGCCAACTAGACCGATTAG-3′ |
| epaB | Forward: 5′-CGGATACAGAAACAACGGAT-3′ Reverse: 5′-TAGAGAATCCGATAGCCTGC-3′ |
|
| epaE | Forward: 5′-CGAAGTCAAATTACGCAGTG-3′ | |
| Reverse: 5′-AGGATTCGTGTGTGCCTGTA-3′ | ||
| epaG | Forward: 5′-CCGATGGTGAAGAAGACAAT-3′ Reverse: 5′-TGATTGTTTCTGCCAAGCCT-3′ |
|
| epaH | Forward: 5′-TCCAAGAAATCCTGGACGAC-3′ Reverse: 5′-CAAATGCCATAAATTCGGCT-3′ |
|
| epaM | Forward: 5′-GAGATACGATGGACGTGACT-3′ Reverse: 5′-TGCTTTACCATTTCTAAGGG-3′ |
|
| epaQ | Forward: 5′-TGGTTTTGTCGGAGTAGCTG-3′ Reverse: 5′-CCACAAAAGGTTCCATACCG-3′ |
|
| epaR | Forward: 5′-AATTTAG`AACGATGTCGGCA-3′ Reverse: 5′-CCGACAATGGACATATCTCC-3′ |