Fig. 2. Effective sample size across a grid of experimental designs.
Sample size N ranges from 40 to 120 individuals in steps of 8 and the number of cells per individuals M ranges from 500 to 2750 cells per individual in steps of 250 (CD4 T cells). a Library preparation is assumed to be 0$ per reaction, level of multiplexing is fixed and equal to 8. b Library preparation is set to $2000 per reaction, level of multiplexing is fixed and equal to 8. c Library preparation is set to $2000 per reaction, greedy multiplexing. d Library preparation is set to $2000 per reaction, greedy multiplexing, demultiplexing inaccuracy, and cell-type misclassification is taken into account.