Table 2.
Nucleotide composition and skewness of mitogenomes of P. tiani and Limassolla sp.
| Regions | Size (bp) | T(U) | C | A | G | AT (%) | GC (%) | AT Skew | GC Skew |
|---|---|---|---|---|---|---|---|---|---|
| Full genome | 17,562/17,053 | 34.3/33.3 | 13.2/14.0 | 42.1/41.7 | 10.4/11.0 | 76.4/75.0 | 23.6/25.0 | 0.103/0.112 | −0.117/−0.119 |
| PCGs | 10,938/10,926 | 42.9/41.5 | 12.4/12.9 | 33.3/33.3 | 11.4/12.3 | 76.2/74.8 | 23.8/25.2 | −0.126/−0.110 | −0.041/−0.025 |
| 1st codon position | 3646/3642 | 36.9/35.1 | 13.4/11.5 | 36.3/36.6 | 15.7/16.8 | 73.2/71.7 | 26.8/28.3 | −0.008/0.022 | 0.172/0.187 |
| 2nd codon position | 3646/3642 | 48.4/48.0 | 14.4/17.6 | 20.4/21.1 | 13.7/13.3 | 68.8/69.1 | 31.3/30.9 | −0.407/−0.389 | −0.123/−0.137 |
| 3rd codon position | 3646/3642 | 43.4/41.4 | 15.4/9.7 | 43.3/42.1 | 4.8/6.7 | 86.7/83.5 | 13.3/16.4 | −0.002/0.008 | −0.278/−0.182 |
| tRNAs | 1422/1432 | 36.6/40.2 | 16.4/8.4 | 40.6/39.7 | 12.2/11.8 | 77.2/79.9 | 22.7/20.2 | 0.052/0.006 | 0.077/0.170 |
| rRNAs | 1892/1976 | 47.1/46.1 | 17.4/8.5 | 35.6/32.4 | 10.8/13.0 | 82.7/78.5 | 17.4/21.5 | −0.139/−0.173 | 0.244/0.209 |
| A + T rich-region | 3230/2695 | 38.6/35.0 | 18.4/14.7 | 34.0/36.3 | 13.4/14.0 | 72.6/71.3 | 27.4/28.7 | −0.063/0.019 | −0.020/−0.026 |