Table 2.

NS3 amino acid homology of selected Pestivirus A, B and H strains. Approach and methods used are similar to Table 1. For this analysis, the full length NS3 protein sequences were used.

	MH379638.1	M96687	KX987157	KR866116	LC089876	JN400273	JQ799141	AF502399	KJ000672	MH231148	KY683847	FJ040215	JQ612704
MH379638.1 BVDV-1a GB Ho916	100	97.5	97.4	97.4	97.4	97.4	94	91.9	91.1	92.1	92.4	91.8	92.2
M96687 BVDV-1b OSLOSS	99.4	100	97.4	97.8	97.8	97.8	94.3	92.1	90.6	91.9	92.5	91.9	92.4
KX987157 BVDV-1f SLO	99.4	99.4	100	98.1	97.4	98	94.4	92.1	90.8	91.9	92.5	91.9	92.4
KR866116 BVDV-1m CN	99.4	99.4	99.4	100	97.8	98.2	94	92.7	91.4	92.5	92.4	91.5	92.2
LC089876 BVDV-1n JP	99.4	99.4	99.4	99.4	100	97.7	94	91.8	90.3	91.7	92.4	91.9	91.9
JN400273 BVDV-1q SD0803 pig	99.1	99.4	99	99.1	99.1	100	94.6	91.7	90.5	91.5	92.4	91.7	92.2
JQ799141 BVDV-1u Yak CN	98.2	98.2	98.1	98	98	98	100	90.6	89.5	89.9	91.5	91.4	91.5
AF502399 BVDV-2a NY-93	98.2	98	98.4	98.2	98	97.7	97.1	100	97.5	98.1	91.7	90.9	91.5
KJ000672 BVDV-2b SD1301	97.5	97.5	98	97.8	97.5	97.2	96.3	99	100	97.7	90.3	89.9	90.8
MH231148 BVDV-2c 12-149150	98.1	97.8	98.2	98.1	97.8	97.5	96.9	99.6	99.1	100	91.1	90.3	91.2
KY683847 BVDV-3 BRA Bos Ind	97.2	97.2	96.9	97.4	97.2	97.2	96.6	96.6	95.9	96.5	100	98.5	99.6
FJ040215 BVDV-3 Thai KK	97.2	97.2	96.9	97.2	97.2	96.9	96.6	96.3	95.9	96.2	99.3	100	98.4
JQ612704 BVDV-3 IT	97.2	97.2	96.9	97.4	96.9	97.2	96.6	96.6	96.2	96.5	99.7	99.3	100