Table 1.
Methicillin-resistant S. aureus (MRSA) strains, sample types, and sampling locations as well as species markers, agr groups, and capsule types.
| Clonal Complex | Strain | Isolate ID | Number | Sampling Location | Host Species | gapA, katA, coA, nuc1, spa, sbi, eno, clfA+B, fnbA | Staphyloxanthin Operon | agr Group | Capsule Type |
|---|---|---|---|---|---|---|---|---|---|
| CC06 | CC6-MRSA-IV | B | 1 | Nilbarahi | Rhesus | POS | not tested | I | 8 |
| CC22 | CC22-MRSA-IV (PVL+/tst+) | 93, 94, 05, 97, C | 5 | 2 Gokarna, 1 each Chitwan, Ramdi and Nilbarahi | 1 Assam, 4 Rhesus |
POS | not tested | I | 5 |
| CC772 | CC772-MRSA-V (PVL+), “Bengal Bay” | 91 | 1 | Hetauda | Rhesus | POS | not tested | II | 5 |
| CC15 | CC15-MSSA | 83 | 1 | Rupandehi | Rhesus | POS | not tested | II | 8 |
| CC96 | CC96-MSSA | 89 | 1 | Ramdi | Assam | POS | not tested | III | 8 |
| CC2990 | CC2990-MSSA | H | 1 | Guheswari | Rhesus | POS | POS | II | 8 |
| UNKNOWN 01 | ST(4-13-1-105-11-5-x)-MSSA | 86, 87 | 2 | Ramdi | Assam | POS | POS | I | 5 |
| UNKNOWN 02 | ST(1-421-1-1-12-238-11)-MSSA | 52, 53 | 2 | Gokarna | Rhesus | POS | POS | I | 5 |
| UNKNOWN 03 | ST(1-3-1-15-28-x-1)-MSSA | 31, 32, 71, D | 4 | 2 Nilbarahi, 1 each Chitwan and Gokarna | Rhesus | POS | POS | I | 8 |
| UNKNOWN 04 | MSSA | 01 | 1 | Pashupati | Rhesus | POS | POS | I | 8 |
| UNKNOWN 05 | ST(1-1-1-1-28-4-11)-MSSA | 73, F | 2 | 1 Chitwan, 1 Gokarna |
Rhesus | POS | POS | I | 8 |
| UNKNOWN 06 | ST(1-421-1-x-x-1-11)-MSSA | 54 | 1 | Gorkarna | Rhesus | POS | POS | I | 8 |
| UNKNOWN 07 | ST(12-x-1-66-11-x-x)-MSSA | 29, 30, 51 | 3 | 2 Swayambhu, 1 Gokarna |
Rhesus | POS | POS | II | 8 |
| UNKNOWN 08 | ST(1-38-1-1-x-238-x)-MSSA | 81, 88 | 2 | 1 Ramdi, 1 Rupandehi |
1 Assam, 1 Rhesus |
POS | POS | II | 8 |
| UNKNOWN 09 | ST(3-3-2-66-28-x-x)-MSSA | 10 | 1 | Pashupati | Rhesus | POS | POS | II | 8 |
| UNKNOWN 10 | ST(3-1-1-66-28-1-x)-MSSA | 82, 90 | 2 | 1 Ramdi, 1 Rupandehi |
1 Assam, 1 Rhesus |
POS | POS | III | 5 |
| UNKNOWN 11 | MSSA | 50 | 1 | Bajrayogini | Rhesus | POS | POS | III | 8 |
| UNKNOWN 12 | ST(4-421-1-105-1-5-x)-MSSA | 61 | 1 | Hetauda | Rhesus | POS | POS | IV | 5 |
| UNKNOWN 13 | ST(1-3-1-x-1-1-11)-MSSA | 62, 72 | 2 | 1 Chitwan, 1 Hetauda |
Rhesus | POS | POS | IV | 5 |
| UNKNOWN 14 | ST(3-38-1-15-1-x-40)-MSSA | G | 1 | Guheswari | Rhesus | POS | POS | IV | 5 |
| UNKNOWN 15 | ST(1-421-1-1-12-1-11)-MSSA | 11, E | 2 | 1 Gokarna, 1 Thapathali |
Rhesus | POS | POS | IV | 5 |
| UNKNOWN 16 | ST(3-3-1-66-4-x-x)-MSSA | 49, I | 2 | 1 Bajrayogini, 1 Guheswari |
Rhesus | POS | POS | IV | 8 |
| UNKNOWN 17 | MSSA | 13 | 1 | Thapathali | Rhesus | POS | POS | IV | 8 |