Table 3.
Gene Ontology, KEGG and Reactome pathways where the candidate genes are significantly enriched (p < 0.05).
| Traits a | Term ID | Term Name | Genes | p-Value |
|---|---|---|---|---|
| BT | GO:0006869 | lipid transport | PRELID1 | 0.010233961 |
| GO:0010876 | lipid localization | PRELID1 | 0.014172362 | |
| GO:0005319 | lipid transporter activity | PRELID1 | 0.019846208 | |
| GO:0006629 | lipid metabolic process | FGFR4 | 0.025006995 | |
| GO:0008289 | lipid binding | COMMD1, PFN3 | 0.047311441 | |
| GO:0008610 | lipid biosynthetic process | FGFR4 | 0.035303187 | |
| KEGG:04015 | Rap1 signaling pathway | RGS14 | 0.047961872 | |
| CW | GO:0001558 | regulation of cell growth | SGK3 | 0.044446017 |
| GO:0007173 | epidermal growth factor receptor signaling pathway | FAM83A | 0.039752933 | |
| GO:0016049 | cell growth | POU4F3 | 0.035059849 | |
| GO:0035264 | multicellular organism growth | PLAG1 | 0.030366765 | |
| GO:0035265 | organ growth | PLAG1, CGA | 0.025673681 | |
| GO:0040007 | growth | PLAG1, POU4F3, CGA, SGK3 | 0.020980597 | |
| GO:0048589 | developmental growth | PLAG1, POU4F3, CGA | 0.016287514 | |
| GO:0060560 | developmental growth involved in morphogenesis | POU4F3 | 0.01159443 | |
| GO:0005515 | protein binding | ARFGEF1, ATAD2, LYN, MYBL1, RB1CC1, AKIRIN2, CRH, CGA, NPBWR1, PENK, PPP1R42, RGS20, TCERG1, ZHX1, ZHX2 | 0.006901346 | |
| KEGG:04080 | Neuroactive ligand-receptor interaction | CGA, HTR1E, NPBWR1, OPRK1, PENK, CRH | 0.039862933 | |
| EMA | GO:0006629 | lipid metabolic process | LYN, SDR16C5 | 0.049805624 |
| GO:0019216 | regulation of lipid metabolic process | LYN | 0.042803519 | |
| GO:0033993 | response to lipid | DDX5 | 0.043747312 | |
| GO:0008289 | lipid binding | TEX2 | 0.049508111 | |
| KEGG:04514 | Cell adhesion molecules | LOC100140873, PECAM1 | 0.04067771 | |
| REAC:R-BTA-210990 | PECAM1 interactions | LYN, PECAM1 | 0.049805624 | |
| MS | GO:0006629 | lipid metabolic process | CREBL2 | 0.01889403 |
| GO:0006869 | lipid transport | APOLD1, MSR1 | 0.041826385 | |
| GO:0008610 | lipid biosynthetic process | CREBL2 | 0.021157549 | |
| GO:0010876 | lipid localization | APOLD1 | 0.016791777 | |
| GO:0019915 | lipid storage | MSR1 | 0.025742261 | |
| GO:0045444 | fat cell differentiation | CREBL2 | 0.019486141 | |
| GO:0008289 | lipid transport | APOLD1 | 0.017945142 | |
| GO:0071814 | protein-lipid complex binding | MSR1 | 0.016404143 | |
| KEGG:04010 | MAPK signaling pathway | DUSP16, FGF20 | 0.014863145 | |
| REAC:R-BTA-5673001 | RAF/MAP kinase cascade | DUSP16, FGF20, GRIN2B | 0.016791777 | |
| YW | GO:0001558 | regulation of cell growth | ADAM10, SGK3 | 0.046130564 |
| GO:0016049 | cell growth | ADAM10 | 0.043928692 | |
| GO:0035264 | multicellular organism growth | PLAG1 | 0.04172682 | |
| GO:0035265 | organ growth | PLAG1 | 0.039524949 | |
| GO:0040007 | growth | ADAM10, PLAG1, SGK3 | 0.037323077 | |
| GO:0040008 | regulation of growth | ADAM10, SGK3, MYO1E | 0.035121205 | |
| GO:0048589 | developmental growth | PLAG1 | 0.032919333 | |
| GO:0070848 | response to growth factor | IBSP, RNF111 | 0.030717462 | |
| GO:0071363 | cellular response to growth factor stimulus | RNF111 | 0.02851559 | |
| GO:0005515 | protein binding | ADAM10, ARFGEF1, LYN, MYBL1, PPARGC1A, RB1CC1, CRH, MEPE, NPBWR1, PKD2, PENK, PPP1R24, RGS20, SPP1 | 0.026313718 | |
| GO:0140096 | catalytic activity, acting on a protein | ADAM10, CCNB2, COPS5, CPA6, GGH, HERC3, HERC5, HERC6, LYN, MOS, PCMTD1, PPM1K, RNF111, RNF139, SGK3, VCPIP1, NSMCE2 | 0.048130564 |
a BT, Backfat Thickness; CW, Carcass Weight; EMA, Eye Muscle Area; MS, Marbling Score; YW, Yearling Weight.