Table 8.
Phylum | Genus | Study Period | a-LCD (n =22) | LFD (n =23) | Z | p(adj. val.) |
---|---|---|---|---|---|---|
Firmicutes | Baseline | 0.389 (0.283,0.729) | 0.544 (0.455,0.671) | −1.317 | 0.188 (0.194) | |
Third month | 0.580 (0.371,0.672) | 0.684 (0.561,0.778) | −2.317 | 0.021 * (0.026) | ||
Z | −1.282 | −2.281 | ||||
p(adj. val.) | 0.200 (0.213) | 0.023 * (0.038) | ||||
Roseburia | Baseline | 0.002 (0.000,0.005) | 0.009 (0.005,0.024) | −1.892 | <0.01 ** (<0.01) | |
Third month | 0.005 (0.000,0.006) | 0.000 (0.000,0.001) | −2.626 | <0.01 ** (<0.01) | ||
Z | −2.193 | −4.075 | ||||
p(adj. val.) | 0.028 * (0.021) | <0.01 ** (<0.01) | ||||
Eubacterium | Baseline | 0.008 (0.004,0.0220) | 0.037 (0.018,0.070) | −3.747 | <0.01 ** (<0.01) | |
Third month | 0.026 (0.004,0.057) | 0.042 (0.024,0.099) | −2.082 | 0.037 * (0.073) | ||
Z | −2.678 | −1.734 | ||||
p(adj. val.) | <0.01 ** (0.013) | 0.083 (0.052) | ||||
Ruminococcus | Baseline | 0.017 (0.011,0.033) | 0.020 (0.005,0.037) | −0.829 | 0.470 (0.407) | |
Third month | 0.026 (0.005,0.044) | 0.005 (0.000,0.019) | −2.015 | 0.044 * (0.073) | ||
Z | −0.341 | −2.312 | ||||
p | 0.733 (0.308) | 0.021 * (0.020) | ||||
Lactobacillus | Baseline | 0.007 (0.003,0.049) | 0.005 (0.002,0.012) | −1.420 | 0.156 (0.223) | |
Third month | 0.007 (0.000,0.068) | 0.000 (0.000,0.047) | −1.666 | 0.096 (0.245) | ||
Z | −1.150 | −0.973 | ||||
p(adj. val.) | 0.130 (0.073) | 0.330 (0.167) | ||||
Bacteroidetes | Baseline | 0.249 (0.120,0.323) | 0.110 (0.072,0.180) | −2.793 | <0.01 ** (0.011) | |
Third month | 0.151 (0.061,0.256) | 0.108 (0.042,0.236) | −0.591 | 0.555 (0.415) | ||
Z | −2.451 | −1.004 | ||||
p(adj. val.) | 0.014 * (0.016) | 0.361 (0.188) | ||||
Bacteroides | Baseline | 0.144 (0.057,0.256) | 0.047 (0.023,0.119) | −3.244 | <0.01 ** (<0.01) | |
Third month | 0.064 (0.027,0.106) | 0.057 (0.009,0.085) | −0.978 | 0.328 (0.364) | ||
Z | −2.354 | −0.335 | ||||
p(adj. val.) | 0.019 * (0.013) | 0.735 (0.308) |
Z-value and p-value for comparisons by Mann–Whitney U or Wilcoxon for between or within group differences at the baseline and third month, the result presented as M (P25,P75). * p < 0.05; ** p < 0.01; M(P25,P50): median (25th and 75th percentile). P value (adj. val.), FDR < 0.2 was considered as significant.