Table 1.
Strain | DTU | Size (Mbp) | Contigs | Contig N50 | %GC | Date of Version | Sequencing Method | References |
---|---|---|---|---|---|---|---|---|
G | I | 25.17 | 1450 | 74,655 | 47.40 | November 2018 | Roche 454 | [50] |
Dm28c | I | 53.27 | 636 | 317,638 | 51.60 | May 2018 | Illumina + PacBio | [55] |
Sylvio X10/1 | I | 38.59 | 27,019 | 2307 | 51.20 | October 2012 | Roche 454 + Illumina | [49,57] |
Berenice | II | 40.80 | 934 | 148,957 | 51.20 | June 2020 | Illumina + Nanopore | [54] |
Y | II | 39.34 | 10,127 | 11,782 | 51.43 | October 2017 | Illumina | [47] |
231 | III | 35.36 | 8469 | 14,202 | 48.60 | January 2018 | Illumina | [48] |
Bug2148 | V | 55.22 | 934 | 196,760 | 51.63 | October 2017 | PacBio | [53] |
CL | VI | 65.00 | 7764 | 73,547 | 39.80 | November 2018 | Roche 454 | [50] |
TCC | VI | 87.06 | 1236 | 264,196 | 51.70 | May 2018 | Illumina + PacBio | [55] |
CL Brener | VI | 89.94 | 32,746 | 14,669 | 51.70 | July 2005 | Sanger | [42] |
BNEL | VI | 32.53 | 41 | 870,934 | 43.94 | December 2015 | Sanger | [58] |
BEL | VI | 32.53 | 41 | 870,934 | 40.35 | December 2015 | Sanger | [58] |
T. c. marinkellei B7 strain | --- | 38.65 | 23,154 | 2846 | 50.90 | October 2012 | Roche 454 + Illumina | [51] |