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. 2020 Oct 19;11:564103. doi: 10.3389/fmicb.2020.564103

FIGURE 1.

FIGURE 1

Core genome MLST tree of all isolates with species designations. 348 isolates, distance based on comparing 2315 alleles using the Enterobase Escherichia/Shigella cgMLST v1 scheme. Missing values are an own category. Gray squares = results of decisive phenotypic tests or serology, box with border only = negative, and filled square = positive. Phenotypic/serologic tests from inner to outer ring: motility, lysine decarboxylase, combination of gas and indole, esculin, salicin fermentation, and inconclusive Shigella serology.