Table 3.
Summary of Cleaning Data Produced by Small RNA Sequencing
| Sample | Total Reads | Clean Reads (%) | Total Base | Clean Base (%) | GC (%) |
|---|---|---|---|---|---|
| SONFH-1 | 25,862,144 | 21,191,046 (81.94%) | 3,879,279,186 | 554,964,161 (14.31%) | 51 |
| SONFH-2 | 17,567,864 | 14,560,008 (82.88%) | 2,635,148,982 | 363,651,380 (13.8%) | 49 |
| SONFH-3 | 28,765,255 | 27,183,453 (94.5%) | 4,314,742,480 | 709,831,082 (16.45%) | 50 |
| Control-1 | 20,529,070 | 18,072,999 (88.04%) | 3,079,324,088 | 457,634,856 (14.86%) | 49 |
| Control-2 | 25,425,246 | 21,279,324 (83.69%) | 3,813,745,364 | 536,466,416 (14.07%) | 51 |
| Control-3 | 21,126,154 | 16,812,559 (79.58%) | 3,168,887,826 | 428,744,417 (13.53%) | 52 |
| Average | 23,212,622 | 19,849,898 (85.10%) | 3,481,854,654 | 508,548,718 (14.61%) | 50 |