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. 2020 Oct;30(10):1533–1546. doi: 10.1101/gr.262790.120

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© 2020 The Anopheles gambiae 1000 Genomes Consortium; Published by Cold Spring Harbor Laboratory Press

This article, published in Genome Research, is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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Figure 4. — Genetic diversity within populations. (A) Nucleotide diversity ( $θ_{π}$ ) calculated in nonoverlapping 20-kbp genomic windows using SNPs from euchromatic regions of Chromosome 3. (B) Tajima's D calculated in nonoverlapping 20-kbp genomic windows using SNPs from euchromatic regions of Chromosome 3. (C) Runs of homozygosity (ROH) in individual mosquitoes. Each marker represents an individual mosquito. (D) Runs of identity by descent (IBD) between individuals. Each marker represents a pair of individuals drawn from the same population.