Figure 6. Limited overlap of integration sites detected within cell subsets and compartments.

For (A) acute, (B) chronic, and (C) ART-treated states, each plot represents an individual. Each spoke on the inner wheel represents a unique integration site. Spokes with a darker color represent clonally expanded sites. The outer wheel represents the compartment and subset where the integration site was detected. Connecting lines indicate that the same integration site was detected in a different cell subset and is labeled with the gene (or nearest gene) along with genomic location. Symbols appear after gene names as detailed in the legend for Figure 3.