Table 1. Nonsense mutations and their predicted functions in gallbladder isolates.
Position in CT18 | S/NS | Gene | Product | Functional class | GB005 | GB026 | GB044 | GB076 | GB125 | GB169 | GB199 | GB266 | GB281 | GB335 | GB368 | GB387 | GB441 | GB580 | GB705 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
239853‥241370 | STOP | STY0230 | Deoxyguanosine-triphosphate trophosphohydrolase | Central intermediary metabolism | E496* | ||||||||||||||
378398‥378796 | STOP | STY0368 | probable secreted protein | membrane lipoprotein | C46* | ||||||||||||||
598006‥600618 | STOP | fimD | outer membrane usher protein FimD precursor | surface structure | Q386* | ||||||||||||||
1457973‥1458758 | STOP | STY1502 | probable secreted protein | membrane lipoprotein | W162* | ||||||||||||||
complement (1721748‥1722089) | STOP | STY1802 | osmotically inducible lipoprotein E precursor | unknown | Q99* | ||||||||||||||
complement (2513933‥2514808) | STOP | STY2679 | sulphate transport system permease protein CysW | transport anion | W175* | ||||||||||||||
complement (2629668‥2631983) | STOP | pbpC | pencillin binding protein 1C | murein sacculus peptidoglycan | Q246* | ||||||||||||||
complement (2915077‥2916069) | STOP | rpoS | RNA polymerase sigma subunit RpoS | broad regulatory function | W247* | ||||||||||||||
complement (3601247‥3603091) | STOP | STY3744 | vitamin B12 receptor protein | cell envelope | W33* | ||||||||||||||
3795271‥3796734 | STOP | STY3932 | putative membrane transport protein | transport/binding protein | Q15* | ||||||||||||||
complement (4037181‥4038752) | STOP | STY4178 | Conserved hypothetical protein | hypothetical protein | W413* | ||||||||||||||
4123472‥4125214 | STOP | ggt | gamma-glutamyltranspeptidase precursor | thioredoxin | Q105* | ||||||||||||||
4307686‥4308996 | STOP | STY4438 | putative exported protein | membrane lipoprotein | W184* | ||||||||||||||
4442121‥4444211 | STOP | STY4562 | hypothetical protein | SPI-7 | W234* | W234* | |||||||||||||
4593908‥4595071 | STOP | yjfC | conserved hypothetical protein | hypothetical protein | W9* |
* mutations generating a stop codon