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. 2020 Oct;8(19):1225. doi: 10.21037/atm-20-4544

Table 5. Detection of PIK3CA mutations in three types of samples from benign patients.

Sample cfDNA FFPE gDNA
Coverage VarReads VarFreq Coverage VarReads VarFreq Coverage VarReads VarFreq
1 37,290 7,675 20.60% 2,095 0 0 3,728 1,308 35.12%
2 36,643 11,486 31.37% 705 0 0 1,086 0 0
3 30,621 9,918 32.42% 4,060 1,192 29.42% 1,513 0 0
4 20,275 5,777 28.51% 3,658 0 0 2,164 402 18.61%
5 32,658 9,314 28.55% 2,880 671 23.30% 1,445 252 17.44%
6 37,374 10,626 28.47% 4,405 0 0 1,052 164 15.59%
7 37,490 5,964 15.92% 1,815 0 0 2,687 0 0
8 23,675 7,468 31.56% 2,948 979 33.21% 2,841 0 0
9 31,457 9,374 29.81% 5,377 16,81 31.30% 2,937 538 18.33%
10 38,797 10,842 27.98% 8,679 2,462 28.39% 6,207 0 0

cfDNA, cell-free DNA; FFPE, formalin-fixed and paraffin-embedded.