Skip to main content
. 2020 Jul 27;9:775. [Version 1] doi: 10.12688/f1000research.25148.1

Table 1. Results of the assembly for the desert locust genome.

Total Total size (bp) N50 (bp) N90 (bp) Largest (bp) Mean length (bp)
Contigs 1,648,200 8,561,922,307 12,027 5,375 202,979 5,194.71
Scaffolds (MP) 1,233,802 8,632,364,377 66,194 15,575 1,561,787 8,350.11
Scaffolds (PacBio) 955,015 8,817,834,205 157,705 29,453 3,339,430 9,233.20

Scaffolds (MP), Scaffolds reached with the Mate Pair data using the ABySS pipeline; Scaffolds (PacBio), improved scaffolds with the PacBio data as input for LINKS; N50, the sequence length of the shortest contig/scaffold at 50% of the total genome length; N90, the sequence length of the shortest contig/scaffold at 90% of the total genome length