Table 2.
Primer sequences of genes assessed in the colon tissues of female CD-1 mice using real-time quantitative PCR analysis.
| Target gene | Sense primer (5′ → 3′) | Antisense primer (5′ → 3′) | Full name |
|---|---|---|---|
| Inflammation | |||
| Ifng | TCATGGCTGTTTCTGGCTGT | CACCATCCTTTTGCCAGTTCC | Interferon gamma |
| Tnf | AGCCCACGTCGTAGCAAAC | TTTGAGATCCATGCCGTTGG | Tumor necrosis factor |
| Il4 | CTCGAATGTACCAGGAGCCA | GTGGTGTTCTTCGTTGCTGT | Interleukin 4 |
| Il5 | TGACTCTCAGCTGTGTCTGG | AAGCCTCATCGTCTCATTGCT | Interleukin 5 |
| Il6 | ACAAAGCCAGAGTCCTTCAGAG | AGAGCATTGGAAATTGGGGT | Interleukin 6 |
| Il13 | CTCTTGCTTGCCTTGGTGGT | CTCCATACCATGCTGCCGTT | Interleukin 13 |
| Il17a | GCCCTCAGACTACCTCAACC | CAGCTTTCCCTCCGCATTGA | Interleukin 17A |
| Gut integrity | |||
| Zo-1 | ATGTTTATGCGGACGGTGG | TTTCCTCCATTGCTGTGCTCTTA | Zonula occludens-1 |
| Zo-2 | GCAGCTTGTAGTTCTGAGCCG | TACTGCTCCCATATCACCTCCT | Zonula occludens-2 |
| Zo-3 | AAGTGGGGGCTGATTGTTTCCA | AGTGTGGCTGTGTGTTGTTCC | Zonula occludens-3 |
| Ocln | GGTCCTCCTGGCTCAGTTG | AAGATAAGCGAACCTTGGCGG | Occludin |
| Cldn1 | TCTACGAGGGACTGTGGATGT | ATTACCATCAAGGCTCGGGT | Claudin 1 |
| Cldn4 | AGCAAACGTCCACTGTCCTT | GGGGCGTAATGGCAAGAGTA | Claudin 4 |
| Cell regulators/proliferation/apoptosis | |||
| Bcl2 | ATGCCTTTGTGGAACTATATGGC | GGTATGCACCCAGAGTGATGC | B-cell lymphoma 2 |
| Aifm1 | AGGACGGTGAGCAACATGAA | GTTCTATCCACCCATCCCGC | Apoptosis-inducing factor 1 |
| Bcl2l10 | CGCTACACACACTGACTGGA | CTTTAGGATCCCCTGCCCTG | B-cell lymphoma 2 like 10 |
| Ccnb1 | TGCATTCTCTCAGTGCCCTCCACA | AGACAGGAGTGGCGCCTTGGT | Cyclin B1 |
| Ccnd2 | CCTTTGACGCAGGCTCCCTTCT | ACCCTGGTGCACGCATGCAAA | Cyclin D2 |
| Ccna2 | GCTCTACTGCCCGGAGGCTGA | TGGCCTACATGTCCTCTGGGGAA | Cyclin A2 |
| Ccne1 | GGTGTCCTCGCTGCTTCTGCTT | CCGGATAACCATGGCGAACGGA | Cyclin E1 |
| Cdkn1a | TTAGGCAGCTCCAGTGGCAACC | ACCCCCACCACCACACACCATA | Cyclin dependent kinase inhibitor 1A |
| Cdk4 | AGAAACCCTCGCTGAAGCGGCA | TGGGGGTGAACCTCGTAAGGAGA | Cyclin dependent kinase 4 |
| Ki67 | GCTCACCTGGTCACCATCAA | ACTACAGGCAGCTGGATACG | Kiel 67 |
| Housekeeping genes | |||
| -Actin | GGGCACAGTGTGGGTGAC | CTGGCACCACACCTTCTAC | Actin, beta |