Table 2.
Target gene | Sense primer (5′ → 3′) | Antisense primer (5′ → 3′) | Full name |
---|---|---|---|
Inflammation | |||
Ifng | TCATGGCTGTTTCTGGCTGT | CACCATCCTTTTGCCAGTTCC | Interferon gamma |
Tnf | AGCCCACGTCGTAGCAAAC | TTTGAGATCCATGCCGTTGG | Tumor necrosis factor |
Il4 | CTCGAATGTACCAGGAGCCA | GTGGTGTTCTTCGTTGCTGT | Interleukin 4 |
Il5 | TGACTCTCAGCTGTGTCTGG | AAGCCTCATCGTCTCATTGCT | Interleukin 5 |
Il6 | ACAAAGCCAGAGTCCTTCAGAG | AGAGCATTGGAAATTGGGGT | Interleukin 6 |
Il13 | CTCTTGCTTGCCTTGGTGGT | CTCCATACCATGCTGCCGTT | Interleukin 13 |
Il17a | GCCCTCAGACTACCTCAACC | CAGCTTTCCCTCCGCATTGA | Interleukin 17A |
Gut integrity | |||
Zo-1 | ATGTTTATGCGGACGGTGG | TTTCCTCCATTGCTGTGCTCTTA | Zonula occludens-1 |
Zo-2 | GCAGCTTGTAGTTCTGAGCCG | TACTGCTCCCATATCACCTCCT | Zonula occludens-2 |
Zo-3 | AAGTGGGGGCTGATTGTTTCCA | AGTGTGGCTGTGTGTTGTTCC | Zonula occludens-3 |
Ocln | GGTCCTCCTGGCTCAGTTG | AAGATAAGCGAACCTTGGCGG | Occludin |
Cldn1 | TCTACGAGGGACTGTGGATGT | ATTACCATCAAGGCTCGGGT | Claudin 1 |
Cldn4 | AGCAAACGTCCACTGTCCTT | GGGGCGTAATGGCAAGAGTA | Claudin 4 |
Cell regulators/proliferation/apoptosis | |||
Bcl2 | ATGCCTTTGTGGAACTATATGGC | GGTATGCACCCAGAGTGATGC | B-cell lymphoma 2 |
Aifm1 | AGGACGGTGAGCAACATGAA | GTTCTATCCACCCATCCCGC | Apoptosis-inducing factor 1 |
Bcl2l10 | CGCTACACACACTGACTGGA | CTTTAGGATCCCCTGCCCTG | B-cell lymphoma 2 like 10 |
Ccnb1 | TGCATTCTCTCAGTGCCCTCCACA | AGACAGGAGTGGCGCCTTGGT | Cyclin B1 |
Ccnd2 | CCTTTGACGCAGGCTCCCTTCT | ACCCTGGTGCACGCATGCAAA | Cyclin D2 |
Ccna2 | GCTCTACTGCCCGGAGGCTGA | TGGCCTACATGTCCTCTGGGGAA | Cyclin A2 |
Ccne1 | GGTGTCCTCGCTGCTTCTGCTT | CCGGATAACCATGGCGAACGGA | Cyclin E1 |
Cdkn1a | TTAGGCAGCTCCAGTGGCAACC | ACCCCCACCACCACACACCATA | Cyclin dependent kinase inhibitor 1A |
Cdk4 | AGAAACCCTCGCTGAAGCGGCA | TGGGGGTGAACCTCGTAAGGAGA | Cyclin dependent kinase 4 |
Ki67 | GCTCACCTGGTCACCATCAA | ACTACAGGCAGCTGGATACG | Kiel 67 |
Housekeeping genes | |||
-Actin | GGGCACAGTGTGGGTGAC | CTGGCACCACACCTTCTAC | Actin, beta |