Key resources table.
| Reagent type (species) or resource |
Designation | Source or reference | Identifiers | Additional information |
|---|---|---|---|---|
| Strain, strain background (Bacillus subtilis) |
NCIB3610 (abbreviated as 3610); ES3 in Shank Laboratory |
Nye et al., 2017
https://doi.org/10.1128/ genomeA.00364-17 |
GenBank: CP020102.1 | Available from the Shank lab or Bacillus Genetic Stock Center (BGSCID 3A1) |
| Genetic reagent (Bacillus subtilis 3610) |
ES768 | This study; Shank Laboratory |
B. subtilis 3610 amyE::PspacC-YPet-camR; available from Shank lab |
|
| Genetic reagent (Bacillus subtilis 3610) |
ES769 | This study; Shank Laboratory |
eps-tasA biofilm gene mutant, B. subtilis 3610 epsA-O::tet tasA::kan amyE::PspacC-YPet-camR; available from Shank lab |
|
| Gene (Bacillus subtilis) | epsA-0 | GenBank | BSU_34370 through BSU_34220 |
Extracellular polysaccharide biosynthesis operon |
| Gene (Bacillus subtilis) | tasA | GenBank | BSU_24620 | Major component of biofilm matrix |
| Gene (Bacillus subtilis) | YPet | Ethan Garner, Garner Laboratory |
Yellow fluorescent protein codon-optimized for B. subtilis |
|
| Recombinant DNA reagent |
pEA003 | This study; Shank Laboratory |
Available from Shank lab | |
| Recombinant DNA reagent |
pES037 | This study; Shank Laboratory |
Available from Shank lab | |
| Biological sample (Mucor fragilis) |
This study; Shank Laboratory |
Isolated the strain from a tall fescue plant in the Piedmont region of North Carolina by Fletcher Halliday, University of North Carolina, 2016; available from Shank lab |
||
| Software, algorithm | Fiji/ImageJ |
https://imagej.nih.gov/ij/
docs/guide/146-2.html |
RRID:SCR_002285 | |
| Software, algorithm | Raman spectrum analysis software |
Berry et al., 2015, http://shiny.csb. univie.ac.at:3838/scattr/ |
||
| Other | Nafion | IonPower, Newcastle, DE, USA |
POWDion Insoluble −40 + 60 Mesh |
https://ion-power.com/product/
powdion-insoluble-4060-mesh/ |
| Other | cryolite | Wilhelm Niemetz Minalerien, Vienna, Austria |
Crystalline form from Ivigtut, Greenland |