TABLE 4.

Summary of the PHE archived and publicly available strains used within this study, their Strain ID, lineage, phage type, stx profile, assembly accession numbers, and NCBI BioProject.

Strain ID	lineage	Phage type	Stx profile	Number of prophages	Reference	BioProject #	Assembly accession #
PHE archive
194195	IIa	PT24	Stx2a/2c	19	This study	PRJNA315192	CP044350
E30228	Ia	PT4	Stx1a/2a	15	Scotland et al., 1987	PRJNA315192	VXJO00000000
E34500	I/IIa	PT2	Stx2a/2c	14	Taylor et al., 1986	PRJNA315192	VXJN00000000
E45000	I/IIb	PT49	Stx2a	17	Yara et al., 2020	PRJNA315192	VXJM00000000
E116508	Ic	PT21/28	Stx2a/2c	17	Yara et al., 2020	PRJNA315192	VXJP00000000
315176	IIb	PT8	Stx2a	16	Byrne et al., 2018	PRJNA315192	VXJQ00000000
267849	IIa	PT34	Stx2a/2c	16	Gobin et al., 2018	PRJNA315192	VXJR00000000
Publicly available
9000	Ic	PT21/28	Stx2a/2c	17	Shaaban et al., 2016	PRJNA336330	CP018252
397404	Ic	PT21/28	Stx2a/2c	15	Yara et al., 2020	PRJNA315192	CP043019
155	Ic	PT32	Stx2a	18	Shaaban et al., 2016	PRJNA336330	CP018237
350	IIc	PT8	Stx1a/2c	16	Launders et al., 2016b	PRJNA336330	CP018243
272	I/IIa	PT2	Stx2a	16	Jenkins et al., 2015	PRJNA336330	CP018239
644	IIc	PT8	Stx1a/2c	18	Cowley et al., 2016	PRJNA321984	CP015831
180	IIc	PT54	Stx1a/1a/2c	15	Cowley et al., 2016	PRJNA321984	CP015832
Sakai	Ia	n/a	Stx1a/1a/2a	18	Michino et al., 1999	PRJNA57781	NC_002695
EDL933	Ia	n/a	Stx1a/2a	14	Riley et al., 1983	PRJNA253471	CP008957
EC4115	I/IIa	n/a	Stx2a/2c	17	Uhlich et al., 2008	PRJNA224116	NC_011353
TW14359	I/IIa	n/a	Stx2a/2c	17	Uhlich et al., 2008	PRJNA224116	NC_013008