Table 3. ATPase activities ofthree E. coli DEAD box proteins, and site-directed variants in the presence and absence of RNA and RNase E-(696–762).
Protein | Activity without RNAa | Activity with RNAa |
---|---|---|
WT RhlB | ≤0.5b | ≤0.5b |
WT RhlE | 2.9 (0.8) | 32.5 (7.1) |
WT SrmB | 9.3 (0.7) | 34.1(2.3) |
H320D RhlB | NDc | NDc |
D310H RhlE | 7.6 (1.1) | 37.5 (4.0) |
D313H SrmB | 10.4 (2.3) | 36.1 (3.5) |
WT RhlB/RNase E-(696–762)d | ≤0.5b | 5.2 (0.5) |
RhlBΔ1–397/RNase E-(696–762)d | ≤0.5b | ≤0.5b |
H320D RhlB/RNase E-(696–762)d | NDc | NDc |
S381A RhlB | ≤0.5b | ≤0.5b |
S381A RhlB + RNase E-(696–762)d | ≤0.5b | 9.4 (2.2) |
Y383A RhlB | NDc | NDc |
Y383A RhlB + RNase E-(696–762)e | NDc | NDc |
a The activities are expressed in moles of inorganic phosphate released per minute per mol of protein (mol/Pi/min/mol protein). The errors given in parentheses are the mean ± S.D.
b An upper estimate of activity for proteins that display activity on theborderline for the sensitivity of the assay.
c Activity not detectable after 10 min.
d Co-expressed.
e Added stoichiometrically.