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. Author manuscript; available in PMC: 2021 Jul 19.
Published in final edited form as: Nat Methods. 2018 Sep 10;15(10):832–836. doi: 10.1038/s41592-018-0114-z

Table 1. Data sets used in this study.

Dataset Dataset reference Downloaded from Dataset use
3’end sequencing 9 (http://polyasite.unibas.ch) Figures 1,2;Suppl. Figs. 1,2,12
RNA-seq in HEK 293 20 GEO database 33: GSE56010 Figure 3 Suppl. Fig. 7
Ribosome profiling in HEK 293 21 GEO database 33: GSE73136 Figure 3, Suppl. Fig. 7
RNA-seq in tissues from Protein Atlas 26 ArrayExpress database 34: E-MTAB-2836 Figures 2A and 4A, Suppl. Figs. 2A,B, 9 and 10
RNA-seq and PacBio reads in 4 different tissues 25 GEO data base 33: GSE93848 Suppl. Fig. 2C, Suppl. Fig. 8
Single-cell data 27 GEO data base 33: GSE85527 Figure 4B, Suppl. Fig. 11
Mouse data 35 GEO data base 33: GSE52260 Suppl. Fig. 4B, 12