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. Author manuscript; available in PMC: 2022 Nov 30.
Published in final edited form as: Nat Microbiol. 2022 May 30;7(6):856–867. doi: 10.1038/s41564-022-01132-w

Extended Data Figure 1. Changes in focal community strain abundances upon strain drop-in.

Extended Data Figure 1

Heatmap showing log2-transformed fold changes (treatment vs control) for each focal community strain (top) upon strain drop-in (left). Significant changes (DESeq2-normalized counts, Wald test, Benjamini-Hochberg corrected, padj ≤ 0.01, nfocal community = 16, ndrop-in = 3) are indicated with a black frame. Drop-in strains are colored by phylum or Proteobacteria class. Exact p-values are provided in Supplementary Table 2.