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. Author manuscript; available in PMC: 2022 Dec 3.
Published in final edited form as: J Proteome Res. 2021 Nov 4;20(12):5402–5411. doi: 10.1021/acs.jproteome.1c00695

Figure 6.

Figure 6

Analysis of three exemplary human FFPE tissues (A) Number of proteins identified from lymph node, lung and prostate (n=3 each) by standard database searching, match-between-runs enabled and re-scored by Prosit. Horizontal lines depict the total number of proteins identified in each tissue. (B) Cumulative protein abundance distributions of the three human tissues. The inset shows a density plot of protein abundance measured by the iBAQ approach (intensity-based absolute protein quantification). Tissues are color coded and examples for proteins detected in all three tissues but in very different quantities are marked.